Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL591419.1-201ENST00000427423 339 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 AC007969.2-201ENST00000441891 191 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 AL357134.1-201ENST00000445848 426 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 NDUFS5P3-201ENST00000450668 321 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 AC092991.1-201ENST00000477176 376 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.94□□□□□ -1.78
RNF43Q68DV7 AC016632.1-201ENST00000503994 196 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.94□□□□□ -1.78
RNF43Q68DV7 RN7SKP83-201ENST00000516512 178 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 RNU6-703P-201ENST00000516946 107 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.94□□□□□ -1.78
RNF43Q68DV7 LARP7P3-201ENST00000579888 337 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 MIR7975-201ENST00000619350 68 ntBASIC3.94□□□□□ -1.78
RNF43Q68DV7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF43Q68DV7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF43Q68DV7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF43Q68DV7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RNF43Q68DV7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF43Q68DV7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF43Q68DV7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF43Q68DV7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF43Q68DV7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF43Q68DV7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF43Q68DV7 RNU6-1285P-201ENST00000363480 105 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 SNORA22-201ENST00000383907 134 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 RNU6-1279P-201ENST00000383917 103 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 MIR626-201ENST00000385032 94 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 SNORA26.5-201ENST00000391215 123 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 RN7SKP53-201ENST00000411337 315 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 RPS12P23-201ENST00000419579 400 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 AL035423.1-201ENST00000420331 213 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 AL139247.1-201ENST00000422768 325 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF43Q68DV7 CYCSP35-201ENST00000451978 304 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF43Q68DV7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.93□□□□□ -1.78
RNF43Q68DV7 SCARNA8-201ENST00000515924 131 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 RNU6-436P-201ENST00000516171 114 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 RNU6-453P-201ENST00000516819 85 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 RNU2-56P-201ENST00000516826 190 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 TRAV28-201ENST00000557548 323 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF43Q68DV7 AL078604.3-201ENST00000615580 211 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 AC099654.7-201ENST00000635788 2127 ntBASIC3.93□□□□□ -1.78
RNF43Q68DV7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RNF43Q68DV7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF43Q68DV7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.93□□□□□ -1.78
RNF43Q68DV7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RNF43Q68DV7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF43Q68DV7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
RNF43Q68DV7 AF127577.6-201ENST00000623352 2191 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF43Q68DV7 CEP170P1-201ENST00000502249 4587 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 RNU5F-3P-201ENST00000363767 117 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 RNU6-755P-201ENST00000364400 103 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 MIR124-3-201ENST00000384866 87 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RNF43Q68DV7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF43Q68DV7 AC074117.2-201ENST00000417130 397 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 AC091179.3-201ENST00000474761 144 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 AC104619.4-201ENST00000510773 249 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 RN7SKP179-201ENST00000516126 217 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 RNU6-1007P-201ENST00000516586 107 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF43Q68DV7 AC115990.1-201ENST00000526957 301 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.92□□□□□ -1.78
RNF43Q68DV7 AC019159.1-201ENST00000605094 187 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 AP002826.1-201ENST00000608835 315 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 RNVU1-4-201ENST00000612985 164 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 AC013791.1-201ENST00000616619 62 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 MIR3674-201ENST00000636576 68 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF43Q68DV7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF43Q68DV7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.92□□□□□ -1.78
RNF43Q68DV7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF43Q68DV7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RNF43Q68DV7 AC004925.1-201ENST00000624256 2706 ntBASIC3.92□□□□□ -1.78
RNF43Q68DV7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RNF43Q68DV7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RNF43Q68DV7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 Y_RNA.24-201ENST00000362508 103 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 RNU6-324P-201ENST00000363957 106 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 Y_RNA.293-201ENST00000364908 93 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 RNU6-407P-201ENST00000365280 104 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 RNU6-147P-201ENST00000383983 107 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 RNU6-793P-201ENST00000384233 104 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 SNORA8.3-201ENST00000384679 139 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 U3.40-201ENST00000408706 208 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 MIR1290-201ENST00000408735 78 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 RNA5SP475-201ENST00000410568 110 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms