Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 AC023449.1-201ENST00000454464 154 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 AC078918.1-201ENST00000498515 228 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 AC083906.5-201ENST00000503722 328 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 PARP4P3-201ENST00000510265 317 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 AL020997.2-201ENST00000602607 184 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 ZYXP1-201ENST00000617638 118 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNFT1Q5M7Z0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 RNU1-94P-201ENST00000362627 173 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP151-201ENST00000365632 117 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 RNU6-242P-201ENST00000384359 107 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 AC244098.2-201ENST00000422068 99 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 Z74021.1-201ENST00000423610 407 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 AC005921.1-201ENST00000510589 286 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 SNORA31.8-201ENST00000516327 108 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 AC007751.1-201ENST00000529260 376 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 AC141557.1-201ENST00000540982 400 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP196-201ENST00000625967 102 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 AL672167.1-203ENST00000641299 2975 ntBASIC3.98□□□□□ -1.77
RNFT1Q5M7Z0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 MIR383-201ENST00000362257 73 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RNU6-1276P-201ENST00000365372 104 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RPS26P8-201ENST00000393490 348 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP317-201ENST00000410176 116 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP311-201ENST00000411290 116 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 AL121890.1-201ENST00000435457 205 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RPS26P55-201ENST00000471178 356 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RN7SL691P-201ENST00000494487 301 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 HMGB1P22-201ENST00000505315 124 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP446-201ENST00000515955 82 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RNU6-581P-201ENST00000516214 105 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP315-201ENST00000516340 116 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RNU2-44P-201ENST00000516795 194 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RNA5SP312-201ENST00000517068 116 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 MIR4662B-201ENST00000579498 81 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 AC140479.6-201ENST00000633535 357 ntBASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNFT1Q5M7Z0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNFT1Q5M7Z0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNFT1Q5M7Z0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 Y_RNA.111-201ENST00000363248 100 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 RNU6-271P-201ENST00000363858 105 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 RNY1P1-201ENST00000364372 112 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 Y_RNA.366-201ENST00000365540 102 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 RNU1-63P-201ENST00000383902 164 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 SNORA37-201ENST00000384504 129 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 SNORA57.1-201ENST00000391227 145 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 AL355796.1-201ENST00000406706 323 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 MIR1185-2-201ENST00000408687 86 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 RNA5SP49-201ENST00000516450 115 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 MIR2681-201ENST00000581814 105 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 AC091178.1-203ENST00000584586 279 ntBASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNFT1Q5M7Z0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms