Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 RNU6-245P-201ENST00000384020 107 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 RNU6-574P-201ENST00000384265 107 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 RNA5SP213-201ENST00000391031 106 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 SNORA48.8-201ENST00000391324 134 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 NDUFB4P4-201ENST00000404822 243 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.595-201ENST00000410403 105 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 RNU4-47P-201ENST00000410876 114 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AC027124.2-201ENST00000428249 105 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 MICF-203ENST00000432679 129 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 RPL23AP58-201ENST00000440453 469 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AC010095.1-201ENST00000443543 144 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AC109925.1-201ENST00000478069 331 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AC006483.1-201ENST00000487308 313 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 RNU6-1012P-201ENST00000516606 109 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 RN7SKP49-201ENST00000516675 260 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 MIR5004-201ENST00000579078 107 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 MIR4738-201ENST00000579134 87 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AC069294.1-201ENST00000608397 350 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AL162274.2-201ENST00000614406 332 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AC240442.1-201ENST00000616055 283 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FNDC3BQ53EP0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.179-201ENST00000363844 90 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.276-201ENST00000364732 109 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 SET-203ENST00000372688 801 ntTSL 2 BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 MIR568-201ENST00000385036 95 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 SNORA48.5-201ENST00000391143 135 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 CKS1BP2-201ENST00000497342 240 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 AC067942.3-201ENST00000512025 362 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 AC026470.2-201ENST00000561492 181 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 AC105245.1-201ENST00000581934 244 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 uc_338.1-201ENST00000612113 180 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 AC011476.5-201ENST00000615594 130 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 AC130454.1-201ENST00000622948 401 ntBASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FNDC3BQ53EP0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 AC080128.1-201ENST00000474389 1917 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.183-201ENST00000363882 113 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 RNU6-770P-201ENST00000363929 105 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.214-201ENST00000364201 112 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 SNORA18.3-201ENST00000384122 132 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 RNU6-611P-201ENST00000384276 104 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 SNORA12-201ENST00000391162 147 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 RPL21P1-201ENST00000399532 476 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 U6atac.2-201ENST00000408644 118 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 ELOCP20-201ENST00000422460 345 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 AC023141.11-201ENST00000508864 202 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 AL161670.1-201ENST00000554348 137 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 AC023824.2-201ENST00000566185 400 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 MIR4503-201ENST00000582187 83 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 MIR5006-201ENST00000583027 110 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 AC005562.2-201ENST00000618264 111 ntBASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
FNDC3BQ53EP0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.19-201ENST00000362462 99 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.512-201ENST00000384518 102 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 MIR329-1-201ENST00000385028 80 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.597-201ENST00000410463 100 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 BX679664.1-201ENST00000434429 253 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 AL731563.1-201ENST00000442202 214 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 AC091179.1-201ENST00000461606 579 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 Y_RNA.683-201ENST00000516508 93 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 RNU6-586P-201ENST00000517265 104 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 MIR4325-201ENST00000583049 90 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 MIR3149-201ENST00000584629 83 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 AC010205.1-201ENST00000616668 449 ntBASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC3BQ53EP0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms