Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC034105.4-201ENST00000568304 277 ntBASIC3.64□□□□□ -1.83
PMS1P54277 MIR4643-201ENST00000577473 78 ntBASIC3.64□□□□□ -1.83
PMS1P54277 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.64□□□□□ -1.83
PMS1P54277 AL391813.1-201ENST00000603098 260 ntBASIC3.64□□□□□ -1.83
PMS1P54277 AL137843.1-201ENST00000605078 385 ntBASIC3.64□□□□□ -1.83
PMS1P54277 AC005520.5-201ENST00000613926 164 ntBASIC3.64□□□□□ -1.83
PMS1P54277 AC006001.4-201ENST00000622243 395 ntBASIC3.64□□□□□ -1.83
PMS1P54277 IGHVIII-44-202ENST00000636235 289 ntBASIC3.64□□□□□ -1.83
PMS1P54277 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PMS1P54277 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
PMS1P54277 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PMS1P54277 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.63□□□□□ -1.83
PMS1P54277 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PMS1P54277 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.63□□□□□ -1.83
PMS1P54277 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PMS1P54277 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PMS1P54277 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PMS1P54277 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PMS1P54277 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
PMS1P54277 SNORA72.2-201ENST00000365028 127 ntBASIC3.63□□□□□ -1.83
PMS1P54277 Y_RNA.331-201ENST00000365267 102 ntBASIC3.63□□□□□ -1.83
PMS1P54277 MIR218-2-201ENST00000385006 110 ntBASIC3.63□□□□□ -1.83
PMS1P54277 CBX3P9-201ENST00000402326 552 ntBASIC3.63□□□□□ -1.83
PMS1P54277 MIR1298-201ENST00000408783 112 ntBASIC3.63□□□□□ -1.83
PMS1P54277 AL139156.1-201ENST00000412785 841 ntBASIC3.63□□□□□ -1.83
PMS1P54277 RPL23AP36-201ENST00000413895 458 ntBASIC3.63□□□□□ -1.83
PMS1P54277 AL138752.1-201ENST00000452964 351 ntBASIC3.63□□□□□ -1.83
PMS1P54277 AL031183.1-201ENST00000457667 207 ntBASIC3.63□□□□□ -1.83
PMS1P54277 RNU6-625P-201ENST00000459412 107 ntBASIC3.63□□□□□ -1.83
PMS1P54277 RN7SL330P-201ENST00000469709 307 ntBASIC3.63□□□□□ -1.83
PMS1P54277 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.63□□□□□ -1.83
PMS1P54277 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.63□□□□□ -1.83
PMS1P54277 AC233702.2-202ENST00000562547 291 ntBASIC3.63□□□□□ -1.83
PMS1P54277 AC008749.1-201ENST00000597650 306 ntBASIC3.63□□□□□ -1.83
PMS1P54277 MZT1P2-201ENST00000604387 248 ntBASIC3.63□□□□□ -1.83
PMS1P54277 SNRPGP20-201ENST00000604477 205 ntBASIC3.63□□□□□ -1.83
PMS1P54277 uc_338.1-201ENST00000612113 180 ntBASIC3.63□□□□□ -1.83
PMS1P54277 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.63□□□□□ -1.83
PMS1P54277 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PMS1P54277 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PMS1P54277 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.63□□□□□ -1.83
PMS1P54277 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PMS1P54277 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.63□□□□□ -1.83
PMS1P54277 PWAR6-201ENST00000552334 4618 ntBASIC3.63□□□□□ -1.83
PMS1P54277 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PMS1P54277 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PMS1P54277 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PMS1P54277 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PMS1P54277 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PMS1P54277 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PMS1P54277 AC135776.4-201ENST00000624300 1904 ntBASIC3.62□□□□□ -1.83
PMS1P54277 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PMS1P54277 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PMS1P54277 Y_RNA.40-201ENST00000362645 93 ntBASIC3.62□□□□□ -1.83
PMS1P54277 Y_RNA.83-201ENST00000363005 113 ntBASIC3.62□□□□□ -1.83
PMS1P54277 SNORD56.3-201ENST00000363507 71 ntBASIC3.62□□□□□ -1.83
PMS1P54277 RNU6-799P-201ENST00000363567 107 ntBASIC3.62□□□□□ -1.83
PMS1P54277 AL512633.1-201ENST00000399931 655 ntBASIC3.62□□□□□ -1.83
PMS1P54277 RPS29P4-201ENST00000414733 161 ntBASIC3.62□□□□□ -1.83
PMS1P54277 HMGN2P31-201ENST00000432430 273 ntBASIC3.62□□□□□ -1.83
PMS1P54277 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.62□□□□□ -1.83
PMS1P54277 SUMO1P3-201ENST00000439961 304 ntBASIC3.62□□□□□ -1.83
PMS1P54277 NDUFB4P10-201ENST00000452541 359 ntBASIC3.62□□□□□ -1.83
PMS1P54277 AP001324.2-201ENST00000461163 319 ntBASIC3.62□□□□□ -1.83
PMS1P54277 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.62□□□□□ -1.83
PMS1P54277 AC074133.1-201ENST00000515696 183 ntBASIC3.62□□□□□ -1.83
PMS1P54277 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.62□□□□□ -1.83
PMS1P54277 AC018448.1-201ENST00000552843 316 ntBASIC3.62□□□□□ -1.83
PMS1P54277 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.62□□□□□ -1.83
PMS1P54277 AC099654.7-201ENST00000635788 2127 ntBASIC3.62□□□□□ -1.83
PMS1P54277 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.62□□□□□ -1.83
PMS1P54277 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PMS1P54277 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.62□□□□□ -1.83
PMS1P54277 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PMS1P54277 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PMS1P54277 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PMS1P54277 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PMS1P54277 RNU6-378P-201ENST00000384324 107 ntBASIC3.61□□□□□ -1.83
PMS1P54277 Y_RNA.498-201ENST00000384460 102 ntBASIC3.61□□□□□ -1.83
PMS1P54277 POLR2KP2-201ENST00000438155 177 ntBASIC3.61□□□□□ -1.83
PMS1P54277 snoU13.14-201ENST00000459372 104 ntBASIC3.61□□□□□ -1.83
PMS1P54277 AC091179.3-201ENST00000474761 144 ntBASIC3.61□□□□□ -1.83
PMS1P54277 AC103975.1-201ENST00000482506 483 ntBASIC3.61□□□□□ -1.83
PMS1P54277 SNORA64.4-201ENST00000516632 81 ntBASIC3.61□□□□□ -1.83
PMS1P54277 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PMS1P54277 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.61□□□□□ -1.83
PMS1P54277 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PMS1P54277 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
PMS1P54277 Y_RNA.199-201ENST00000364014 102 ntBASIC3.6□□□□□ -1.83
PMS1P54277 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PMS1P54277 CST9LP2-201ENST00000437612 320 ntBASIC3.6□□□□□ -1.83
PMS1P54277 AC115115.1-201ENST00000449927 248 ntBASIC3.6□□□□□ -1.83
PMS1P54277 RPL23AP3-201ENST00000453844 468 ntBASIC3.6□□□□□ -1.83
PMS1P54277 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.6□□□□□ -1.83
PMS1P54277 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.6□□□□□ -1.83
PMS1P54277 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.6□□□□□ -1.83
PMS1P54277 AL162424.1-201ENST00000602325 221 ntBASIC3.6□□□□□ -1.83
PMS1P54277 SNORA51-201ENST00000606420 132 ntBASIC3.6□□□□□ -1.83
PMS1P54277 AL365434.2-201ENST00000607979 234 ntBASIC3.6□□□□□ -1.83
PMS1P54277 AC004792.1-201ENST00000614523 137 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms