Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATN1P54259 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATN1P54259 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATN1P54259 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.26□□□□□ -1.57
ATN1P54259 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATN1P54259 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATN1P54259 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.26□□□□□ -1.57
ATN1P54259 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATN1P54259 MAPK10-286ENST00000641208 8747 ntBASIC5.25□□□□□ -1.57
ATN1P54259 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.25□□□□□ -1.57
ATN1P54259 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.25□□□□□ -1.57
ATN1P54259 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATN1P54259 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATN1P54259 STX3-208ENST00000641815 3236 ntBASIC5.25□□□□□ -1.57
ATN1P54259 RNU1-94P-201ENST00000362627 173 ntBASIC5.25□□□□□ -1.57
ATN1P54259 RNU6-1010P-201ENST00000362757 107 ntBASIC5.25□□□□□ -1.57
ATN1P54259 RNU6-1189P-201ENST00000383958 107 ntBASIC5.25□□□□□ -1.57
ATN1P54259 MIR195-201ENST00000385194 87 ntBASIC5.25□□□□□ -1.57
ATN1P54259 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATN1P54259 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.25□□□□□ -1.57
ATN1P54259 RNU6-523P-201ENST00000516304 54 ntBASIC5.25□□□□□ -1.57
ATN1P54259 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.25□□□□□ -1.57
ATN1P54259 MIR4439-201ENST00000583746 80 ntBASIC5.25□□□□□ -1.57
ATN1P54259 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.25□□□□□ -1.57
ATN1P54259 Y_RNA.773-201ENST00000607168 90 ntBASIC5.25□□□□□ -1.57
ATN1P54259 AC012442.3-202ENST00000636742 206 ntBASIC5.25□□□□□ -1.57
ATN1P54259 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ATN1P54259 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
ATN1P54259 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
ATN1P54259 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.25□□□□□ -1.57
ATN1P54259 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATN1P54259 AC026241.1-201ENST00000517873 2142 ntBASIC5.24□□□□□ -1.57
ATN1P54259 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ATN1P54259 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATN1P54259 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATN1P54259 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATN1P54259 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATN1P54259 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ATN1P54259 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.24□□□□□ -1.57
ATN1P54259 SNORA71.2-201ENST00000364941 134 ntBASIC5.24□□□□□ -1.57
ATN1P54259 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.24□□□□□ -1.57
ATN1P54259 SDHCP2-201ENST00000398565 501 ntBASIC5.24□□□□□ -1.57
ATN1P54259 AC244098.2-201ENST00000422068 99 ntBASIC5.24□□□□□ -1.57
ATN1P54259 YME1L1P1-201ENST00000429435 297 ntBASIC5.24□□□□□ -1.57
ATN1P54259 snoU13.24-201ENST00000458998 104 ntBASIC5.24□□□□□ -1.57
ATN1P54259 RPS17P2-201ENST00000461663 408 ntBASIC5.24□□□□□ -1.57
ATN1P54259 SNORA74C-1-201ENST00000580726 201 ntBASIC5.24□□□□□ -1.57
ATN1P54259 AC064859.1-201ENST00000624741 174 ntBASIC5.24□□□□□ -1.57
ATN1P54259 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATN1P54259 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
ATN1P54259 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ATN1P54259 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ATN1P54259 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.24□□□□□ -1.57
ATN1P54259 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
ATN1P54259 OR14L1P-202ENST00000641545 3009 ntBASIC5.23□□□□□ -1.57
ATN1P54259 AC008079.2-201ENST00000623543 20396 ntBASIC5.23□□□□□ -1.57
ATN1P54259 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.23□□□□□ -1.57
ATN1P54259 NEAT1-202ENST00000501122 22743 ntBASIC5.23□□□□□ -1.57
ATN1P54259 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
ATN1P54259 RN7SKP224-201ENST00000364140 325 ntBASIC5.23□□□□□ -1.57
ATN1P54259 U8.15-201ENST00000390947 134 ntBASIC5.23□□□□□ -1.57
ATN1P54259 RNA5SP171-201ENST00000391071 115 ntBASIC5.23□□□□□ -1.57
ATN1P54259 RPS26P8-201ENST00000393490 348 ntBASIC5.23□□□□□ -1.57
ATN1P54259 MIR300-201ENST00000401138 83 ntBASIC5.23□□□□□ -1.57
ATN1P54259 U3.32-201ENST00000408116 212 ntBASIC5.23□□□□□ -1.57
ATN1P54259 MIR1283-1-201ENST00000408494 87 ntBASIC5.23□□□□□ -1.57
ATN1P54259 AL356387.2-201ENST00000422272 243 ntBASIC5.23□□□□□ -1.57
ATN1P54259 AL356535.1-201ENST00000440335 398 ntBASIC5.23□□□□□ -1.57
ATN1P54259 snoU13.4-201ENST00000458916 104 ntBASIC5.23□□□□□ -1.57
ATN1P54259 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATN1P54259 AC091544.4-201ENST00000555268 342 ntBASIC5.23□□□□□ -1.57
ATN1P54259 RNU6-91P-201ENST00000607774 107 ntBASIC5.23□□□□□ -1.57
ATN1P54259 AC034229.5-201ENST00000624258 185 ntBASIC5.23□□□□□ -1.57
ATN1P54259 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
ATN1P54259 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATN1P54259 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
ATN1P54259 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.22□□□□□ -1.57
ATN1P54259 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATN1P54259 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.22□□□□□ -1.57
ATN1P54259 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATN1P54259 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.22□□□□□ -1.57
ATN1P54259 RPS29P17-201ENST00000430795 166 ntBASIC5.22□□□□□ -1.57
ATN1P54259 AL353813.1-201ENST00000440700 253 ntBASIC5.22□□□□□ -1.57
ATN1P54259 PHBP16-201ENST00000446318 950 ntBASIC5.22□□□□□ -1.57
ATN1P54259 RPS27P22-201ENST00000478056 241 ntBASIC5.22□□□□□ -1.57
ATN1P54259 AC090255.1-201ENST00000495779 349 ntBASIC5.22□□□□□ -1.57
ATN1P54259 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.22□□□□□ -1.57
ATN1P54259 RN7SL558P-201ENST00000497468 299 ntBASIC5.22□□□□□ -1.57
ATN1P54259 HMGB1P22-201ENST00000505315 124 ntBASIC5.22□□□□□ -1.57
ATN1P54259 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC5.22□□□□□ -1.57
ATN1P54259 AC093249.4-201ENST00000564755 259 ntBASIC5.22□□□□□ -1.57
ATN1P54259 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.22□□□□□ -1.57
ATN1P54259 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
ATN1P54259 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATN1P54259 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ATN1P54259 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATN1P54259 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ATN1P54259 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ATN1P54259 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.21□□□□□ -1.57
ATN1P54259 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms