Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RNU5F-4P-201ENST00000516581 114 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.18□□□□□ -2.22
MT-ND4P03905 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 MIR4422-201ENST00000581938 83 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 MIR3941-201ENST00000582572 103 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 NIFKP6-201ENST00000598115 845 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.18□□□□□ -2.22
MT-ND4P03905 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
MT-ND4P03905 AC233981.2-201ENST00000611524 1614 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.17□□□□□ -2.22
MT-ND4P03905 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.17□□□□□ -2.22
MT-ND4P03905 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
MT-ND4P03905 RNU6-996P-201ENST00000365438 107 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 AP000275.1-201ENST00000411943 390 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.17□□□□□ -2.22
MT-ND4P03905 RPL21P111-201ENST00000418453 477 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.17□□□□□ -2.22
MT-ND4P03905 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
MT-ND4P03905 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.17□□□□□ -2.22
MT-ND4P03905 AC073415.1-201ENST00000449240 153 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.17□□□□□ -2.22
MT-ND4P03905 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.17□□□□□ -2.22
MT-ND4P03905 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.17□□□□□ -2.22
MT-ND4P03905 AC090115.3-201ENST00000553218 849 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 AC021231.3-201ENST00000558497 370 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.17□□□□□ -2.22
MT-ND4P03905 AL391646.1-201ENST00000603860 190 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 AL645939.4-201ENST00000604495 135 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 AC087752.4-201ENST00000605911 462 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
MT-ND4P03905 HULC.1-201ENST00000612720 240 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 MIR8074-201ENST00000615081 81 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 AC068205.3-201ENST00000636385 468 ntBASIC1.17□□□□□ -2.22
MT-ND4P03905 SNORD31B-201ENST00000364977 69 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 Y_RNA.381-201ENST00000365666 102 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 SNORA75-201ENST00000384158 137 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
MT-ND4P03905 MIR208B-201ENST00000401172 77 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 MIR1261-201ENST00000408659 82 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC002486.1-201ENST00000435098 391 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC099677.2-201ENST00000436385 175 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AL121601.2-201ENST00000438019 707 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.16□□□□□ -2.22
MT-ND4P03905 AC112492.4-201ENST00000456549 352 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC016925.1-201ENST00000458303 298 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC087477.1-201ENST00000465747 340 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 BET1P1-201ENST00000482276 359 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC099513.1-201ENST00000490423 301 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC025465.3-201ENST00000510570 311 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 Y_RNA.695-201ENST00000516715 107 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.16□□□□□ -2.22
MT-ND4P03905 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.16□□□□□ -2.22
MT-ND4P03905 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.16□□□□□ -2.22
MT-ND4P03905 AC090517.1-201ENST00000569307 266 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 SNORA59B-202ENST00000578183 701 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 VN1R80P-201ENST00000597126 338 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC009994.1-201ENST00000606889 253 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC005520.5-201ENST00000613926 164 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 uc_338.34-201ENST00000617467 174 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 AC005609.4-201ENST00000625071 447 ntBASIC1.16□□□□□ -2.22
MT-ND4P03905 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
MT-ND4P03905 RNU1-76P-201ENST00000362903 159 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 RNU1-78P-201ENST00000391248 165 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 RNU6-174P-201ENST00000410406 106 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.15□□□□□ -2.23
MT-ND4P03905 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.15□□□□□ -2.23
MT-ND4P03905 AL353193.1-201ENST00000421444 268 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.15□□□□□ -2.23
MT-ND4P03905 AC012306.1-201ENST00000423267 114 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 AC015922.2-201ENST00000435593 184 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 MTCO1P44-201ENST00000441935 243 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 MTCO2P3-201ENST00000442543 421 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 RPL31P3-201ENST00000458430 332 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 AC010531.2-201ENST00000465012 153 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 RNU6-567P-201ENST00000516746 107 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 SUMO2P18-201ENST00000518873 252 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.15□□□□□ -2.23
MT-ND4P03905 RRN3P3-201ENST00000549207 578 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 AC121247.2-201ENST00000604776 136 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 AL050343.2-201ENST00000607338 280 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 AL158063.1-201ENST00000615349 536 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 AL354950.2-201ENST00000617939 290 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 MIR7843-201ENST00000622274 79 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.15□□□□□ -2.23
MT-ND4P03905 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.15□□□□□ -2.23
MT-ND4P03905 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.23
MT-ND4P03905 RNU6-203P-201ENST00000384038 104 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 RNU5A-6P-201ENST00000384136 116 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 RNU6-1103P-201ENST00000384150 107 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 RNA5SP219-201ENST00000390940 113 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 RNU6-1158P-201ENST00000391167 107 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 MTCO2P19-201ENST00000427513 598 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 AL121890.1-201ENST00000435457 205 ntBASIC1.14□□□□□ -2.23
MT-ND4P03905 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.14□□□□□ -2.23
MT-ND4P03905 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.14□□□□□ -2.23
MT-ND4P03905 RNU7-138P-201ENST00000459479 64 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms