Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
U3KQE9 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.34□□□□□ -1.87
U3KQE9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
U3KQE9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
U3KQE9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
U3KQE9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
U3KQE9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
U3KQE9 RNU6-978P-201ENST00000364371 103 ntBASIC3.34□□□□□ -1.87
U3KQE9 SNORD32B-201ENST00000364460 84 ntBASIC3.34□□□□□ -1.87
U3KQE9 SNORA51.4-201ENST00000364993 124 ntBASIC3.34□□□□□ -1.87
U3KQE9 SNORA22-201ENST00000383907 134 ntBASIC3.34□□□□□ -1.87
U3KQE9 RNU6-1080P-201ENST00000383982 107 ntBASIC3.34□□□□□ -1.87
U3KQE9 SNORA20B-201ENST00000384220 132 ntBASIC3.34□□□□□ -1.87
U3KQE9 RNU6-136P-201ENST00000384663 107 ntBASIC3.34□□□□□ -1.87
U3KQE9 MIR29B2-201ENST00000385055 81 ntBASIC3.34□□□□□ -1.87
U3KQE9 AL121890.1-201ENST00000435457 205 ntBASIC3.34□□□□□ -1.87
U3KQE9 RPL39P40-201ENST00000445481 146 ntBASIC3.34□□□□□ -1.87
U3KQE9 AC073264.2-201ENST00000448886 166 ntBASIC3.34□□□□□ -1.87
U3KQE9 HMGN2P16-201ENST00000456802 261 ntBASIC3.34□□□□□ -1.87
U3KQE9 AC010598.1-201ENST00000510378 103 ntBASIC3.34□□□□□ -1.87
U3KQE9 RNA5SP153-201ENST00000516498 76 ntBASIC3.34□□□□□ -1.87
U3KQE9 RNU6-126P-201ENST00000516685 103 ntBASIC3.34□□□□□ -1.87
U3KQE9 AC134698.5-201ENST00000519444 336 ntBASIC3.34□□□□□ -1.87
U3KQE9 NDUFA5P6-201ENST00000542110 379 ntBASIC3.34□□□□□ -1.87
U3KQE9 RN7SL176P-201ENST00000580352 264 ntBASIC3.34□□□□□ -1.87
U3KQE9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.34□□□□□ -1.87
U3KQE9 AC006435.5-201ENST00000624486 112 ntBASIC3.34□□□□□ -1.87
U3KQE9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
U3KQE9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.34□□□□□ -1.88
U3KQE9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
U3KQE9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
U3KQE9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
U3KQE9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.33□□□□□ -1.88
U3KQE9 AC138915.1-201ENST00000565427 1685 ntBASIC3.33□□□□□ -1.88
U3KQE9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.33□□□□□ -1.88
U3KQE9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.33□□□□□ -1.88
U3KQE9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
U3KQE9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
U3KQE9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.33□□□□□ -1.88
U3KQE9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
U3KQE9 RNY1P11-201ENST00000363759 113 ntBASIC3.33□□□□□ -1.88
U3KQE9 RNA5SP28-201ENST00000363841 119 ntBASIC3.33□□□□□ -1.88
U3KQE9 RNU6-147P-201ENST00000383983 107 ntBASIC3.33□□□□□ -1.88
U3KQE9 Y_RNA.525-201ENST00000384570 113 ntBASIC3.33□□□□□ -1.88
U3KQE9 SNORA40.5-201ENST00000391061 128 ntBASIC3.33□□□□□ -1.88
U3KQE9 SNORD66.1-201ENST00000391230 76 ntBASIC3.33□□□□□ -1.88
U3KQE9 SNORA11F-201ENST00000408237 128 ntBASIC3.33□□□□□ -1.88
U3KQE9 Y_RNA.622-201ENST00000411091 108 ntBASIC3.33□□□□□ -1.88
U3KQE9 AL135786.1-201ENST00000415892 214 ntBASIC3.33□□□□□ -1.88
U3KQE9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.33□□□□□ -1.88
U3KQE9 AL358232.1-201ENST00000448030 501 ntBASIC3.33□□□□□ -1.88
U3KQE9 RN7SL610P-201ENST00000463845 291 ntBASIC3.33□□□□□ -1.88
U3KQE9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.33□□□□□ -1.88
U3KQE9 Y_RNA.694-201ENST00000516677 117 ntBASIC3.33□□□□□ -1.88
U3KQE9 AP006289.1-201ENST00000538089 277 ntBASIC3.33□□□□□ -1.88
U3KQE9 AC131055.1-201ENST00000584626 316 ntBASIC3.33□□□□□ -1.88
U3KQE9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
U3KQE9 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.33□□□□□ -1.88
U3KQE9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.33□□□□□ -1.88
U3KQE9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.33□□□□□ -1.88
U3KQE9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
U3KQE9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
U3KQE9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.33□□□□□ -1.88
U3KQE9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
U3KQE9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.33□□□□□ -1.88
U3KQE9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
U3KQE9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
U3KQE9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
U3KQE9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.32□□□□□ -1.88
U3KQE9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
U3KQE9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
U3KQE9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
U3KQE9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
U3KQE9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.32□□□□□ -1.88
U3KQE9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.32□□□□□ -1.88
U3KQE9 MFSD8-216ENST00000641147 4009 ntBASIC3.32□□□□□ -1.88
U3KQE9 AL391516.1-201ENST00000554380 2449 ntBASIC3.32□□□□□ -1.88
U3KQE9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.32□□□□□ -1.88
U3KQE9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
U3KQE9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
U3KQE9 RNU6-235P-201ENST00000362644 107 ntBASIC3.32□□□□□ -1.88
U3KQE9 Y_RNA.124-201ENST00000363339 93 ntBASIC3.32□□□□□ -1.88
U3KQE9 RNU6-647P-201ENST00000364243 107 ntBASIC3.32□□□□□ -1.88
U3KQE9 RNU6-198P-201ENST00000384258 104 ntBASIC3.32□□□□□ -1.88
U3KQE9 MIR129-1-201ENST00000384972 72 ntBASIC3.32□□□□□ -1.88
U3KQE9 RNU2-49P-201ENST00000410666 184 ntBASIC3.32□□□□□ -1.88
U3KQE9 AL590139.1-201ENST00000416267 400 ntBASIC3.32□□□□□ -1.88
U3KQE9 AL356387.2-201ENST00000422272 243 ntBASIC3.32□□□□□ -1.88
U3KQE9 RPEP3-201ENST00000425462 676 ntBASIC3.32□□□□□ -1.88
U3KQE9 RPL7AP28-201ENST00000464513 571 ntBASIC3.32□□□□□ -1.88
U3KQE9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
U3KQE9 RPL23AP54-201ENST00000495129 419 ntBASIC3.32□□□□□ -1.88
U3KQE9 RNU6-1299P-201ENST00000516316 100 ntBASIC3.32□□□□□ -1.88
U3KQE9 AC024614.2-201ENST00000577584 372 ntBASIC3.32□□□□□ -1.88
U3KQE9 AC008739.2-201ENST00000597006 317 ntBASIC3.32□□□□□ -1.88
U3KQE9 AC097639.2-201ENST00000603159 172 ntBASIC3.32□□□□□ -1.88
U3KQE9 AC006254.2-201ENST00000603259 279 ntBASIC3.32□□□□□ -1.88
U3KQE9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
U3KQE9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
U3KQE9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms