Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AC099654.7-201ENST00000635788 2127 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC103988.1-201ENST00000566382 2177 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-626P-201ENST00000363354 107 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 SNORA5A-201ENST00000384111 134 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 SNORA18.3-201ENST00000384122 132 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 RNA5SP293-201ENST00000410527 113 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC091179.1-201ENST00000461606 579 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC073901.1-201ENST00000462471 408 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 SEPT14P8-201ENST00000508026 178 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC104619.4-201ENST00000510773 249 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 RAC1P5-201ENST00000512182 576 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-496P-201ENST00000516145 99 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 RNU1-45P-201ENST00000517191 141 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC104027.1-201ENST00000521887 300 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC005357.1-201ENST00000588399 301 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 MIR8058-201ENST00000615737 89 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 U4.6-201ENST00000621618 127 ntBASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA9Q9Y5H5 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 AL391987.6-201ENST00000305671 199 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 AL359837.1-201ENST00000381357 287 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 MIR554-201ENST00000384874 96 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 CYCSP4-201ENST00000429682 331 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 MICF-203ENST00000432679 129 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 HMGN1P18-201ENST00000457642 277 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 MIR3128-201ENST00000581957 66 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 AC006130.2-201ENST00000586202 326 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 AC012433.1-201ENST00000588916 398 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 AC008739.2-201ENST00000597006 317 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 MZT1P2-201ENST00000604387 248 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 RPL17P51-201ENST00000605218 238 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 SNORD113-5-201ENST00000607261 78 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 TCL6_2.1-201ENST00000615162 119 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 AC018692.3-201ENST00000623929 123 ntBASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA9Q9Y5H5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 RNU4-90P-201ENST00000362773 141 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-961P-201ENST00000363893 105 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 Y_RNA.237-201ENST00000364439 102 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 SNORA73.2-201ENST00000364946 201 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-20P-201ENST00000384106 107 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 Y_RNA.552-201ENST00000384665 112 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-907P-201ENST00000390924 102 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 SNORA46.1-201ENST00000391069 153 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 MIR548H3-201ENST00000408771 118 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AL133547.1-201ENST00000448546 220 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 RN7SL542P-201ENST00000467147 294 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AC117440.1-201ENST00000474107 571 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AC091179.3-201ENST00000474761 144 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AC106707.2-201ENST00000484182 374 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 MTND1P19-201ENST00000511780 315 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-1338P-201ENST00000516328 91 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 Y_RNA.680-201ENST00000516441 93 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-388P-201ENST00000517012 105 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 RNU6-389P-201ENST00000517048 105 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 RPL30P11-203ENST00000598995 310 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 MIR7851-201ENST00000610611 160 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AL357075.2-201ENST00000614906 189 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AC005562.2-201ENST00000618264 111 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AC039056.2-201ENST00000622261 511 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AC009093.8-201ENST00000641769 292 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 AL021368.2-201ENST00000606125 5352 ntBASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PCDHA9Q9Y5H5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHA9Q9Y5H5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms