Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 RNU6-661P-201ENST00000362409 107 ntBASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 MIR1283-1-201ENST00000408494 87 ntBASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 AL513477.1-202ENST00000417061 214 ntBASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 AL161651.1-201ENST00000440882 223 ntBASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 RPL34P20-201ENST00000442771 351 ntBASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 AC090255.1-201ENST00000495779 349 ntBASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 AC096577.2-201ENST00000611455 153 ntBASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 MIR6839-201ENST00000620425 113 ntBASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SCAF1Q9H7N4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC7.34□□□□□ -1.24
SCAF1Q9H7N4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 RNU6-1189P-201ENST00000383958 107 ntBASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 SNORD56.6-201ENST00000384569 71 ntBASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 RNU4-37P-201ENST00000410214 84 ntBASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 RNA5SP113-201ENST00000410486 84 ntBASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 Y_RNA.621-201ENST00000411065 96 ntBASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 AC008507.4-201ENST00000585464 127 ntBASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 MIR6716-201ENST00000613413 80 ntBASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 AC004944.1-201ENST00000517807 3059 ntBASIC7.33□□□□□ -1.24
SCAF1Q9H7N4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 RNU6-679P-201ENST00000391003 106 ntBASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 AC109327.1-201ENST00000471666 403 ntBASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 IGKV1-32-201ENST00000519290 311 ntBASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 HSPE1P19-201ENST00000603327 295 ntBASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 RPL17P51-201ENST00000605218 238 ntBASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 MIR3199-2-201ENST00000636243 86 ntBASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC7.32□□□□□ -1.24
SCAF1Q9H7N4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 RNU1-146P-201ENST00000364015 165 ntBASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 MIR195-201ENST00000385194 87 ntBASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 U8.15-201ENST00000390947 134 ntBASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 RN7SL244P-201ENST00000493405 297 ntBASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 MIR4753-201ENST00000585119 83 ntBASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
SCAF1Q9H7N4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 SNORD115-19-201ENST00000363098 82 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 SNORD115-18-201ENST00000363293 82 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 RNU1-96P-201ENST00000364163 162 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 RNU6-335P-201ENST00000364563 113 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 SNORD115-17-201ENST00000364612 82 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 RNU6-438P-201ENST00000365561 103 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 SNORD96B-201ENST00000386148 79 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 Z98742.3-201ENST00000418637 326 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 RPL30P4-201ENST00000429309 333 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 AP001486.1-201ENST00000463339 476 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 MIR3683-201ENST00000580847 82 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 MIR3939-201ENST00000582614 106 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 AC022217.4-201ENST00000604389 163 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 AL356218.2-201ENST00000605264 187 ntBASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SCAF1Q9H7N4 RNU6-1010P-201ENST00000362757 107 ntBASIC7.29□□□□□ -1.24
SCAF1Q9H7N4 Y_RNA.410-201ENST00000383992 113 ntBASIC7.29□□□□□ -1.24
SCAF1Q9H7N4 AC108751.2-201ENST00000469993 231 ntBASIC7.29□□□□□ -1.24
SCAF1Q9H7N4 NIP7P2-201ENST00000485801 544 ntBASIC7.29□□□□□ -1.24
SCAF1Q9H7N4 RNU6-523P-201ENST00000516304 54 ntBASIC7.29□□□□□ -1.24
SCAF1Q9H7N4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC7.29□□□□□ -1.24
SCAF1Q9H7N4 MIR4458-201ENST00000578872 75 ntBASIC7.29□□□□□ -1.24
SCAF1Q9H7N4 AC006435.5-201ENST00000624486 112 ntBASIC7.29□□□□□ -1.24
SCAF1Q9H7N4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms