Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 Y_RNA.56-201ENST00000362798 112 ntBASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 SNORA25.3-201ENST00000363205 127 ntBASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 SNORA25B-201ENST00000365507 128 ntBASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 AL033519.1-201ENST00000407266 307 ntBASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 AC016397.1-201ENST00000412463 242 ntBASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 RN7SL515P-201ENST00000463999 297 ntBASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 RPS26P6-201ENST00000475156 348 ntBASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 SCARNA16.3-201ENST00000516595 184 ntBASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 AL591135.1-201ENST00000401578 5914 ntBASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU6-247P-201ENST00000362636 107 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 SNORA48.1-201ENST00000390879 135 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU6-269P-201ENST00000391077 97 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 AC098934.3-201ENST00000430450 190 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 AC009474.2-201ENST00000451383 136 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 RN7SL390P-201ENST00000470634 284 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 TRBV12-2-201ENST00000489763 344 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU6-1265P-201ENST00000516342 103 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 IGHV1-14-201ENST00000523391 241 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 SNRPCP6-201ENST00000528310 210 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 AC021506.2-201ENST00000612354 169 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 Evf-2_5p.1-201ENST00000614213 142 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 pRNA.9-201ENST00000618609 89 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 AL117339.4-201ENST00000608335 7063 ntBASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP3-3Q9BYR6 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 IPO8P1-201ENST00000455509 3109 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 SELENOWP1-201ENST00000322792 252 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 RNA5SP350-201ENST00000363298 111 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 RN7SKP237-201ENST00000364663 301 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms