Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM11Q96F44 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
TRIM11Q96F44 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM11Q96F44 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM11Q96F44 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM11Q96F44 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
TRIM11Q96F44 AC073073.2-201ENST00000609827 2578 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM11Q96F44 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM11Q96F44 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM11Q96F44 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM11Q96F44 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.17□□□□□ -1.74
TRIM11Q96F44 AC092268.1-201ENST00000342691 405 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 SNORD56.1-201ENST00000362913 68 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 RNU6-1048P-201ENST00000364054 107 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 MIR518D-201ENST00000385014 87 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 HSPE1P26-201ENST00000405341 275 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 RNY4P30-201ENST00000410216 95 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 RNU2-37P-201ENST00000410695 177 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 AC078809.1-201ENST00000427601 140 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 RPS23P7-201ENST00000466210 444 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 RPL23AP14-201ENST00000468281 468 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 RPS4XP13-201ENST00000483219 789 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 RPL23AP70-201ENST00000483361 460 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM11Q96F44 Y_RNA.677-201ENST00000516401 85 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 MRPL49P2-201ENST00000521066 465 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM11Q96F44 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM11Q96F44 CENPCP1-201ENST00000533085 2578 ntBASIC4.17□□□□□ -1.74
TRIM11Q96F44 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM11Q96F44 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM11Q96F44 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM11Q96F44 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM11Q96F44 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM11Q96F44 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM11Q96F44 MIR423-201ENST00000362201 94 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 Z98749.2-208ENST00000381646 500 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 RNU6-1181P-201ENST00000384191 106 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 RNU1-89P-201ENST00000384592 164 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM11Q96F44 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM11Q96F44 VDAC1P3-201ENST00000434069 851 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM11Q96F44 SNRPEP9-201ENST00000436794 238 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 AL714022.1-201ENST00000439897 151 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 AC007215.1-201ENST00000464893 276 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 AC006463.2-201ENST00000473326 348 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 RNU6-703P-201ENST00000516946 107 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 RNU6-1183P-201ENST00000517054 60 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 RNU6-537P-201ENST00000517277 103 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM11Q96F44 AC090132.2-201ENST00000615881 347 ntBASIC4.16□□□□□ -1.74
TRIM11Q96F44 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM11Q96F44 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.16□□□□□ -1.74
TRIM11Q96F44 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM11Q96F44 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM11Q96F44 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
TRIM11Q96F44 AC004925.1-201ENST00000624256 2706 ntBASIC4.15□□□□□ -1.74
TRIM11Q96F44 Y_RNA.35-201ENST00000362601 101 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 SNORD73B-201ENST00000364394 72 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 MIR544A-201ENST00000384855 91 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 MT-TT-201ENST00000387460 66 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TRIM11Q96F44 AL606845.1-201ENST00000404881 255 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 RNU6-710P-201ENST00000410424 105 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 YPEL5P1-201ENST00000419731 367 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 RPL27AP8-201ENST00000424277 446 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 AL691449.1-201ENST00000426570 421 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM11Q96F44 RPL39P29-201ENST00000447779 157 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 AL031737.1-201ENST00000450125 223 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM11Q96F44 SNRPGP3-201ENST00000469405 227 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.15□□□□□ -1.75
TRIM11Q96F44 RNU6-561P-201ENST00000516222 102 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 AL356575.1-201ENST00000603008 283 ntBASIC4.15□□□□□ -1.75
TRIM11Q96F44 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TRIM11Q96F44 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM11Q96F44 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM11Q96F44 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM11Q96F44 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TRIM11Q96F44 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM11Q96F44 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.14□□□□□ -1.75
TRIM11Q96F44 RNU1-62P-201ENST00000362599 164 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 RNA5SP130-201ENST00000364431 114 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 Y_RNA.280-201ENST00000364765 112 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM11Q96F44 RNU6-1264P-201ENST00000383891 107 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 Y_RNA.584-201ENST00000391090 114 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM11Q96F44 AL591034.1-201ENST00000407447 340 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 AC074117.2-201ENST00000417130 397 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 AC012306.1-201ENST00000423267 114 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 RN7SKP289-201ENST00000517244 295 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 RNA5SP179-201ENST00000517284 121 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 AC090142.3-201ENST00000519012 385 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 YPEL5P3-201ENST00000547227 352 ntBASIC4.14□□□□□ -1.75
TRIM11Q96F44 MIR3939-201ENST00000582614 106 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms