Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL139811.1-201ENST00000424779 2299 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 MAPK10-372ENST00000641954 3413 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 SNORD115-30-201ENST00000364117 82 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 RNU6-728P-201ENST00000365375 104 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 Y_RNA.369-201ENST00000365568 117 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 RNU6-1336P-201ENST00000383886 109 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 RNU6-245P-201ENST00000384020 107 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 SNORA18.3-201ENST00000384122 132 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 MIR199A2-201ENST00000385289 110 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 SNORA75.5-201ENST00000391291 81 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 CYCSP19-201ENST00000411715 316 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 RPL39P29-201ENST00000447779 157 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 RNU7-141P-201ENST00000459304 62 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 RN7SL132P-201ENST00000478131 296 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 RNU1-45P-201ENST00000517191 141 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 MIR4286-201ENST00000580651 93 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 uc_338.32-201ENST00000615087 172 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 AC039056.2-201ENST00000622261 511 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 U2.21-201ENST00000637295 81 ntBASIC3.54□□□□□ -1.84
ATG4DQ86TL0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.54□□□□□ -1.84
ATG4DQ86TL0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 RNU1-62P-201ENST00000362599 164 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 RNU6-778P-201ENST00000363269 103 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 Y_RNA.341-201ENST00000365341 102 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AL359837.1-201ENST00000381357 287 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 RNU6-1264P-201ENST00000383891 107 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 SNORD116-21-201ENST00000384507 92 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 RNU6-1228P-201ENST00000391014 107 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 SNORA26.3-201ENST00000391119 136 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 RNU6-855P-201ENST00000410395 104 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 RPL31P41-201ENST00000477967 372 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AC090525.1-201ENST00000479116 478 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AC103975.1-201ENST00000482506 483 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 RPS4XP13-201ENST00000483219 789 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 RNU6-1061P-201ENST00000516530 99 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AC133485.4-201ENST00000561835 220 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AL360157.1-201ENST00000565962 87 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AC138907.4-201ENST00000570107 226 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 Y_RNA.757-201ENST00000578934 114 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AL606490.9-201ENST00000603331 271 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AL670379.3-201ENST00000605040 251 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 MIR6134-201ENST00000617606 109 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATG4DQ86TL0 AC118273.1-201ENST00000525324 3006 ntBASIC3.53□□□□□ -1.84
ATG4DQ86TL0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.85
ATG4DQ86TL0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.584-201ENST00000391090 114 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 SNORA48.7-201ENST00000391302 135 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 MIR1302-4-201ENST00000408701 150 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 RNU6-383P-201ENST00000410864 94 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AC092047.1-201ENST00000424997 240 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AL445584.1-201ENST00000431451 330 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 Y_RNA.651-201ENST00000459380 103 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 PPIAP15-201ENST00000479662 484 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 HMGB1P22-201ENST00000505315 124 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AC090142.3-201ENST00000519012 385 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AC011471.1-201ENST00000585766 187 ntBASIC3.52□□□□□ -1.85
ATG4DQ86TL0 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATG4DQ86TL0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms