Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 SNORD45.3-201ENST00000363836 72 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 Y_RNA.243-201ENST00000364481 109 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 SNORA62.3-201ENST00000365110 153 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 SNORD58C-201ENST00000365223 64 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 RNU1-73P-201ENST00000383971 164 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 SNORA48.5-201ENST00000391143 135 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 SDHCP2-201ENST00000398565 501 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC006028.1-201ENST00000438379 402 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 SNRPGP8-201ENST00000454064 226 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 RNU6-581P-201ENST00000516214 105 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 Y_RNA.692-201ENST00000516627 105 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC011471.1-201ENST00000585766 187 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC113403.1-201ENST00000604910 193 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC110741.2-201ENST00000605278 268 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC004832.5-201ENST00000608677 401 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AL121890.5-201ENST00000620848 304 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC034229.5-201ENST00000624258 185 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 RNA5SP196-201ENST00000625967 102 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC106871.1-201ENST00000568324 3102 ntBASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FOXR1Q6PIV2 AC006504.1-201ENST00000562493 3666 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 RNA5SP283-201ENST00000365604 119 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 RNU6-597P-201ENST00000365620 102 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 MIR554-201ENST00000384874 96 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 SNORA12.1-201ENST00000390873 148 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 SNORA26.2-201ENST00000390922 122 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 U3.26-201ENST00000391236 204 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 MIR208B-201ENST00000401172 77 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 RPS4XP2-201ENST00000458402 793 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 RN7SL132P-201ENST00000478131 296 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 RNU1-45P-201ENST00000517191 141 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 RNU2-60P-201ENST00000517290 128 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 MIR4458-201ENST00000578872 75 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 MIR6891-201ENST00000618788 93 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 AC112484.5-201ENST00000624189 228 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 AC073073.2-201ENST00000609827 2578 ntBASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FOXR1Q6PIV2 AC118273.1-201ENST00000525324 3006 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 AC022336.2-201ENST00000568966 2538 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 MIR372-201ENST00000362225 67 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 MIR367-201ENST00000362299 68 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 RNU6-294P-201ENST00000364999 102 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 Y_RNA.456-201ENST00000384232 111 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 RNU6-19P-201ENST00000384718 107 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 MIR670-201ENST00000390142 98 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 MIR1290-201ENST00000408735 78 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 RNU6-710P-201ENST00000410424 105 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 RN7SKP202-201ENST00000410439 330 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 RNA5SP504-201ENST00000410676 117 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 RPL26P9-201ENST00000457466 433 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 AC099778.2-201ENST00000610904 211 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 uc_338.13-201ENST00000618243 179 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 AC106754.2-201ENST00000623006 233 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 AC138915.1-201ENST00000565427 1685 ntBASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.24□□□□□ -1.73
FOXR1Q6PIV2 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 ADAM3A-203ENST00000461344 2157 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 RNU6-640P-201ENST00000363693 105 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 RNU6-106P-201ENST00000384405 107 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 MIR1278-201ENST00000408753 81 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 RPL23AP52-201ENST00000439311 478 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 snoU13.24-201ENST00000458998 104 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 CKS1BP7-201ENST00000522230 235 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 MIR5688-201ENST00000580619 83 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 MIR378D2-201ENST00000580636 98 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 MIR6715B-201ENST00000637172 77 ntBASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXR1Q6PIV2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms