Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RPL23AP46-201ENST00000438548 490 ntBASIC3.43□□□□□ -1.86
SHOXO15266 RN7SL98P-201ENST00000462271 300 ntBASIC3.43□□□□□ -1.86
SHOXO15266 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.43□□□□□ -1.86
SHOXO15266 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.43□□□□□ -1.86
SHOXO15266 RNU1-117P-201ENST00000517041 158 ntBASIC3.43□□□□□ -1.86
SHOXO15266 HSPE1P18-201ENST00000517602 280 ntBASIC3.43□□□□□ -1.86
SHOXO15266 MIR3145-201ENST00000580727 82 ntBASIC3.43□□□□□ -1.86
SHOXO15266 DEFB117-201ENST00000602356 141 ntBASIC3.43□□□□□ -1.86
SHOXO15266 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.43□□□□□ -1.86
SHOXO15266 U6.106-201ENST00000636360 105 ntBASIC3.43□□□□□ -1.86
SHOXO15266 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHOXO15266 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHOXO15266 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHOXO15266 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.43□□□□□ -1.86
SHOXO15266 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.43□□□□□ -1.86
SHOXO15266 RNU1-75P-201ENST00000347264 129 ntBASIC3.42□□□□□ -1.86
SHOXO15266 RNA5SP505-201ENST00000364748 108 ntBASIC3.42□□□□□ -1.86
SHOXO15266 Y_RNA.304-201ENST00000365011 112 ntBASIC3.42□□□□□ -1.86
SHOXO15266 Y_RNA.435-201ENST00000384095 112 ntBASIC3.42□□□□□ -1.86
SHOXO15266 HMGN2P31-201ENST00000432430 273 ntBASIC3.42□□□□□ -1.86
SHOXO15266 Z75741.1-201ENST00000446793 314 ntBASIC3.42□□□□□ -1.86
SHOXO15266 RN7SL303P-201ENST00000469773 251 ntBASIC3.42□□□□□ -1.86
SHOXO15266 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
SHOXO15266 RNA5SP112-201ENST00000515937 99 ntBASIC3.42□□□□□ -1.86
SHOXO15266 RNU2-44P-201ENST00000516795 194 ntBASIC3.42□□□□□ -1.86
SHOXO15266 RNU2-12P-201ENST00000517216 168 ntBASIC3.42□□□□□ -1.86
SHOXO15266 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.42□□□□□ -1.86
SHOXO15266 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHOXO15266 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.42□□□□□ -1.86
SHOXO15266 AC008739.2-201ENST00000597006 317 ntBASIC3.42□□□□□ -1.86
SHOXO15266 AC010620.2-201ENST00000600135 313 ntBASIC3.42□□□□□ -1.86
SHOXO15266 CR392039.5-201ENST00000623201 510 ntBASIC3.42□□□□□ -1.86
SHOXO15266 U2.22-201ENST00000636441 106 ntBASIC3.42□□□□□ -1.86
SHOXO15266 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.42□□□□□ -1.86
SHOXO15266 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.42□□□□□ -1.86
SHOXO15266 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SHOXO15266 CEP170P1-201ENST00000502249 4587 ntBASIC3.42□□□□□ -1.86
SHOXO15266 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHOXO15266 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHOXO15266 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHOXO15266 snoU2_19.1-201ENST00000362361 80 ntBASIC3.41□□□□□ -1.86
SHOXO15266 RNU6-1272P-201ENST00000362776 107 ntBASIC3.41□□□□□ -1.86
SHOXO15266 U3.8-201ENST00000363675 217 ntBASIC3.41□□□□□ -1.86
SHOXO15266 RNVU1-6-201ENST00000364688 164 ntBASIC3.41□□□□□ -1.86
SHOXO15266 Y_RNA.308-201ENST00000365043 101 ntBASIC3.41□□□□□ -1.86
SHOXO15266 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SHOXO15266 RNU6-1083P-201ENST00000384022 107 ntBASIC3.41□□□□□ -1.86
SHOXO15266 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SHOXO15266 SNORA48.8-201ENST00000391324 134 ntBASIC3.41□□□□□ -1.86
SHOXO15266 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHOXO15266 AL157831.1-201ENST00000426134 473 ntBASIC3.41□□□□□ -1.86
SHOXO15266 AL445584.1-201ENST00000431451 330 ntBASIC3.41□□□□□ -1.86
SHOXO15266 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SHOXO15266 RPS27P29-201ENST00000463110 252 ntBASIC3.41□□□□□ -1.86
SHOXO15266 RN7SL459P-201ENST00000481078 302 ntBASIC3.41□□□□□ -1.86
SHOXO15266 SRIP1-201ENST00000489235 288 ntBASIC3.41□□□□□ -1.86
SHOXO15266 AP002001.1-203ENST00000534002 267 ntBASIC3.41□□□□□ -1.86
SHOXO15266 MIR5692C2-201ENST00000577959 77 ntBASIC3.41□□□□□ -1.86
SHOXO15266 MIR4738-201ENST00000579134 87 ntBASIC3.41□□□□□ -1.86
SHOXO15266 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.41□□□□□ -1.86
SHOXO15266 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SHOXO15266 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHOXO15266 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SHOXO15266 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHOXO15266 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHOXO15266 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.4□□□□□ -1.86
SHOXO15266 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.4□□□□□ -1.86
SHOXO15266 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SHOXO15266 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SHOXO15266 RNU6-923P-201ENST00000364753 107 ntBASIC3.4□□□□□ -1.87
SHOXO15266 Y_RNA.329-201ENST00000365209 107 ntBASIC3.4□□□□□ -1.87
SHOXO15266 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.4□□□□□ -1.87
SHOXO15266 RNU6-211P-201ENST00000384047 107 ntBASIC3.4□□□□□ -1.87
SHOXO15266 RNU6-918P-201ENST00000391219 106 ntBASIC3.4□□□□□ -1.87
SHOXO15266 U3.40-201ENST00000408706 208 ntBASIC3.4□□□□□ -1.87
SHOXO15266 RNU6-710P-201ENST00000410424 105 ntBASIC3.4□□□□□ -1.87
SHOXO15266 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
SHOXO15266 BTF3P11-201ENST00000426582 477 ntBASIC3.4□□□□□ -1.87
SHOXO15266 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.4□□□□□ -1.87
SHOXO15266 snoU13.1-201ENST00000459157 104 ntBASIC3.4□□□□□ -1.87
SHOXO15266 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHOXO15266 RNU6-1278P-201ENST00000516130 107 ntBASIC3.4□□□□□ -1.87
SHOXO15266 RNU6-966P-201ENST00000516479 104 ntBASIC3.4□□□□□ -1.87
SHOXO15266 TVP23BP1-201ENST00000557500 617 ntBASIC3.4□□□□□ -1.87
SHOXO15266 MIR4765-201ENST00000585007 77 ntBASIC3.4□□□□□ -1.87
SHOXO15266 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.4□□□□□ -1.87
SHOXO15266 AC008873.1-201ENST00000625051 138 ntBASIC3.4□□□□□ -1.87
SHOXO15266 AL034408.1-202ENST00000636088 415 ntBASIC3.4□□□□□ -1.87
SHOXO15266 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHOXO15266 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHOXO15266 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHOXO15266 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHOXO15266 RNU1-14P-201ENST00000362759 152 ntBASIC3.39□□□□□ -1.87
SHOXO15266 RNA5SP447-201ENST00000363749 119 ntBASIC3.39□□□□□ -1.87
SHOXO15266 RNA5SP139-201ENST00000364340 117 ntBASIC3.39□□□□□ -1.87
SHOXO15266 Y_RNA.240-201ENST00000364469 95 ntBASIC3.39□□□□□ -1.87
SHOXO15266 SNORA14A-201ENST00000364773 135 ntBASIC3.39□□□□□ -1.87
SHOXO15266 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SHOXO15266 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.39□□□□□ -1.87
SHOXO15266 AC004866.1-201ENST00000411748 78 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms