Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AL441985.1-201ENST00000457727 251 ntBASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 RNU6-928P-201ENST00000516876 104 ntBASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 RN7SKP260-201ENST00000516907 149 ntBASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 MIR4270-201ENST00000581799 70 ntBASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 AC007229.1-201ENST00000590455 412 ntBASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
PCDHGA4Q9Y5G9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 RNU6-655P-201ENST00000362858 107 ntBASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 RNY3P2-201ENST00000362918 102 ntBASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 RNU1-32P-201ENST00000363937 159 ntBASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 RNU6-787P-201ENST00000384032 107 ntBASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 SNORD108-201ENST00000459332 71 ntBASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 RNU6-221P-201ENST00000459541 99 ntBASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 JPX_2.1-201ENST00000614161 69 ntBASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDHGA4Q9Y5G9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PCDHGA4Q9Y5G9 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.9□□□□□ -1.62
PCDHGA4Q9Y5G9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
PCDHGA4Q9Y5G9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
PCDHGA4Q9Y5G9 Y_RNA.73-201ENST00000362910 113 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 RN7SKP113-201ENST00000363891 295 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 SNORA4.2-201ENST00000365313 147 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 RNU6-788P-201ENST00000390967 104 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR300-201ENST00000401138 83 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 HSPE1P12-201ENST00000412576 301 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 RPL39P25-201ENST00000449384 154 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 AC008155.2-201ENST00000464337 397 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 RPL23AP67-201ENST00000465341 474 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 RNU6-857P-201ENST00000515893 110 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 RNU5F-4P-201ENST00000516581 114 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 AC011602.1-201ENST00000546484 331 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR4737-201ENST00000583979 81 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 AC012493.2-201ENST00000595083 291 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 AC091152.3-201ENST00000604227 325 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 AC006435.5-201ENST00000624486 112 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 AL162726.3-218ENST00000636401 95 ntBASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHGA4Q9Y5G9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 SCARNA15-201ENST00000607520 4325 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR548D2-201ENST00000384955 97 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 MT-TI-201ENST00000387365 69 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 RN7SL385P-201ENST00000468873 276 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 RN7SL807P-201ENST00000470923 297 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 AC019288.1-201ENST00000557918 224 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 AC022254.1-201ENST00000567857 235 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 AC209154.1-201ENST00000582156 337 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR8069-1-201ENST00000616627 86 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 AL591926.8-201ENST00000616876 211 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 MIR8069-2-201ENST00000621412 86 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 AC011266.1-201ENST00000624119 3569 ntBASIC4.89□□□□□ -1.63
PCDHGA4Q9Y5G9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PCDHGA4Q9Y5G9 snoU2_19.1-201ENST00000362361 80 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms