Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MT-TF-201ENST00000387314 71 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 U8.13-201ENST00000390842 128 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 RNA5SP474-201ENST00000391234 90 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 AL139100.1-201ENST00000408001 498 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 RNA5SP280-201ENST00000411230 115 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 AL162591.2-201ENST00000449634 317 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 AC097635.1-201ENST00000450678 155 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 AL031183.1-201ENST00000457667 207 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 RN7SL263P-201ENST00000467969 290 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 BX510359.5-201ENST00000515651 304 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU6-656P-201ENST00000516785 107 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 SCARNA18.2-201ENST00000516882 84 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 AP005639.1-201ENST00000526939 192 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 RN7SL270P-201ENST00000579643 281 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR3657-201ENST00000584818 117 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 AC110741.2-201ENST00000605278 268 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 UCA1.1-201ENST00000620952 75 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 AC243725.1-201ENST00000637164 436 ntBASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 UG0898H09-202ENST00000623646 7040 ntBASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 RNA5SP442-201ENST00000365050 107 ntBASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU6-1054P-201ENST00000411293 104 ntBASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 RPS26P11-201ENST00000463445 348 ntBASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 RNU2-58P-201ENST00000516403 183 ntBASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 AL161931.1-201ENST00000612768 246 ntBASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 MIR6740-201ENST00000618268 113 ntBASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 AP001264.1-201ENST00000620602 703 ntBASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC3.22□□□□□ -1.89
KRTAP3-3Q9BYR6 DOCK11P1-201ENST00000553480 5932 ntBASIC3.21□□□□□ -1.89
KRTAP3-3Q9BYR6 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
KRTAP3-3Q9BYR6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC3.21□□□□□ -1.89
KRTAP3-3Q9BYR6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
KRTAP3-3Q9BYR6 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 NBPF8-201ENST00000583271 5330 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU6-495P-201ENST00000362995 107 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 LCN1P2-201ENST00000372030 223 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU6-1165P-201ENST00000410119 107 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 RPS21P1-201ENST00000434479 247 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 RN7SL216P-201ENST00000471607 298 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 RN7SL849P-201ENST00000485236 295 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 AC107952.1-201ENST00000524200 376 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 MIR1273F-201ENST00000580581 99 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 MIR4428-201ENST00000584884 73 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 AC024255.1-201ENST00000614376 102 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 AC116165.3-201ENST00000614524 400 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 AC061999.1-201ENST00000624454 177 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 MAPK10-349ENST00000641767 3661 ntBASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
KRTAP3-3Q9BYR6 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP3-3Q9BYR6 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms