Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ZNF720P1-201ENST00000562403 1939 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 RNA5SP87-201ENST00000384155 118 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 AC006466.1-201ENST00000438721 289 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 RPS4XP11-201ENST00000446897 772 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 RNU6-893P-201ENST00000458841 100 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 RNU7-14P-201ENST00000459331 62 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 RPS27P22-201ENST00000478056 241 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 AC022655.2-201ENST00000577280 318 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 RN7SL176P-201ENST00000580352 264 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 FAM27D1-201ENST00000612308 341 ntBASIC4.87□□□□□ -1.63
PTCD2Q8WV60 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
PTCD2Q8WV60 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCD2Q8WV60 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCD2Q8WV60 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PTCD2Q8WV60 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCD2Q8WV60 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.86□□□□□ -1.63
PTCD2Q8WV60 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTCD2Q8WV60 RNY1P1-201ENST00000364372 112 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 Y_RNA.244-201ENST00000364484 109 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 RNVU1-6-201ENST00000364688 164 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 AC114755.2-201ENST00000413520 361 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 RPL39P39-201ENST00000455840 151 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 AC022137.1-201ENST00000483735 151 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 RNU6-1270P-201ENST00000517128 108 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 AC134698.5-201ENST00000519444 336 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 AC011604.1-201ENST00000545978 196 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 MIR4737-201ENST00000583979 81 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 MIR6748-201ENST00000610433 71 ntBASIC4.86□□□□□ -1.63
PTCD2Q8WV60 NEAT1-202ENST00000501122 22743 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PTCD2Q8WV60 RNU6-242P-201ENST00000384359 107 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 MIR607-201ENST00000385241 96 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 AC023141.4-201ENST00000412031 328 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 RPS26P2-201ENST00000440331 348 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 AC112771.1-201ENST00000463581 102 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 RN7SL807P-201ENST00000470923 297 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.85□□□□□ -1.63
PTCD2Q8WV60 RN7SKP21-201ENST00000516503 220 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 RNY4P20-201ENST00000516678 93 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCD2Q8WV60 uc_338.18-201ENST00000615451 175 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 U6.73-201ENST00000619194 103 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PTCD2Q8WV60 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PTCD2Q8WV60 AL672296.1-201ENST00000427780 2158 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 Z73965.1-201ENST00000623412 2297 ntBASIC4.85□□□□□ -1.63
PTCD2Q8WV60 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTCD2Q8WV60 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PTCD2Q8WV60 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.85□□□□□ -1.63
PTCD2Q8WV60 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 RNU1-94P-201ENST00000362627 173 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 SNORA56-201ENST00000383966 129 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 Y_RNA.466-201ENST00000384294 113 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 RNU6-975P-201ENST00000384296 105 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 AL031121.1-201ENST00000406553 254 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 RNA5SP113-201ENST00000410486 84 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 AC008134.1-201ENST00000420943 193 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 RPS29P33-201ENST00000456717 146 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 RNU6-830P-201ENST00000516353 107 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 RNA5SP395-201ENST00000516567 118 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 AP001781.1-201ENST00000530977 207 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 AP001880.2-201ENST00000538233 448 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 AC096577.2-201ENST00000611455 153 ntBASIC4.84□□□□□ -1.63
PTCD2Q8WV60 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
PTCD2Q8WV60 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
PTCD2Q8WV60 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PTCD2Q8WV60 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 RNU1-83P-201ENST00000363426 164 ntBASIC4.83□□□□□ -1.64
PTCD2Q8WV60 RNU4-36P-201ENST00000364294 144 ntBASIC4.83□□□□□ -1.64
PTCD2Q8WV60 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD2Q8WV60 SNORD61-201ENST00000384252 73 ntBASIC4.83□□□□□ -1.64
PTCD2Q8WV60 Y_RNA.625-201ENST00000411256 107 ntBASIC4.83□□□□□ -1.64
PTCD2Q8WV60 EIF4EP4-201ENST00000424916 578 ntBASIC4.83□□□□□ -1.64
PTCD2Q8WV60 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms