Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SNORA31.16-201ENST00000516773 139 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.89□□□□□ -2.27
ACTBP60709 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.89□□□□□ -2.27
ACTBP60709 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.89□□□□□ -2.27
ACTBP60709 CYP3A52P-201ENST00000563326 91 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.89□□□□□ -2.27
ACTBP60709 BNIP3P8-201ENST00000597863 560 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AL121992.2-201ENST00000606262 256 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AC009878.1-201ENST00000621819 340 ntBASIC0.89□□□□□ -2.27
ACTBP60709 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ACTBP60709 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
ACTBP60709 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ACTBP60709 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.88□□□□□ -2.27
ACTBP60709 RNU6-500P-201ENST00000362349 107 ntBASIC0.88□□□□□ -2.27
ACTBP60709 RNU6-1019P-201ENST00000364424 107 ntBASIC0.88□□□□□ -2.27
ACTBP60709 SNORD31B-201ENST00000364977 69 ntBASIC0.88□□□□□ -2.27
ACTBP60709 RNU6-45P-201ENST00000384471 107 ntBASIC0.88□□□□□ -2.27
ACTBP60709 RPS29P13-201ENST00000402041 169 ntBASIC0.88□□□□□ -2.27
ACTBP60709 MRPL42P2-201ENST00000403169 426 ntBASIC0.88□□□□□ -2.27
ACTBP60709 AL117342.1-201ENST00000404861 406 ntBASIC0.88□□□□□ -2.27
ACTBP60709 RNU6-1245P-201ENST00000411130 106 ntBASIC0.88□□□□□ -2.27
ACTBP60709 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.88□□□□□ -2.27
ACTBP60709 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.88□□□□□ -2.27
ACTBP60709 AC078809.1-201ENST00000427601 140 ntBASIC0.88□□□□□ -2.27
ACTBP60709 AC010975.2-201ENST00000427781 588 ntBASIC0.88□□□□□ -2.27
ACTBP60709 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.88□□□□□ -2.27
ACTBP60709 AC244670.1-201ENST00000436879 112 ntBASIC0.88□□□□□ -2.27
ACTBP60709 TAF9P1-201ENST00000445421 515 ntBASIC0.88□□□□□ -2.27
ACTBP60709 ATP5J2P3-201ENST00000451550 258 ntBASIC0.88□□□□□ -2.27
ACTBP60709 TAF9P2-201ENST00000454958 515 ntBASIC0.88□□□□□ -2.27
ACTBP60709 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
ACTBP60709 AC034244.1-201ENST00000507687 207 ntBASIC0.88□□□□□ -2.27
ACTBP60709 AC104136.1-201ENST00000512969 394 ntBASIC0.88□□□□□ -2.27
ACTBP60709 MTCO3P28-201ENST00000513351 515 ntBASIC0.88□□□□□ -2.27
ACTBP60709 SNORD116-28-201ENST00000516123 91 ntBASIC0.88□□□□□ -2.27
ACTBP60709 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.88□□□□□ -2.27
ACTBP60709 AC023050.3-201ENST00000541142 333 ntBASIC0.88□□□□□ -2.27
ACTBP60709 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.88□□□□□ -2.27
ACTBP60709 HMGN1P30-201ENST00000589286 268 ntBASIC0.88□□□□□ -2.27
ACTBP60709 AC090578.1-201ENST00000604955 591 ntBASIC0.88□□□□□ -2.27
ACTBP60709 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.88□□□□□ -2.27
ACTBP60709 AC006927.3-201ENST00000638789 384 ntBASIC0.88□□□□□ -2.27
ACTBP60709 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
ACTBP60709 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
ACTBP60709 RNU1-76P-201ENST00000362903 159 ntBASIC0.87□□□□□ -2.27
ACTBP60709 RNU6-336P-201ENST00000364891 107 ntBASIC0.87□□□□□ -2.27
ACTBP60709 Y_RNA.324-201ENST00000365165 102 ntBASIC0.87□□□□□ -2.27
ACTBP60709 SNORD115-7-201ENST00000365306 82 ntBASIC0.87□□□□□ -2.27
ACTBP60709 MIR499A-201ENST00000384903 122 ntBASIC0.87□□□□□ -2.27
ACTBP60709 RNU2-7P-201ENST00000410794 178 ntBASIC0.87□□□□□ -2.27
ACTBP60709 RNU6-293P-201ENST00000411259 106 ntBASIC0.87□□□□□ -2.27
ACTBP60709 POLR2J4-204ENST00000418424 324 ntBASIC0.87□□□□□ -2.27
ACTBP60709 AL590135.1-201ENST00000422215 156 ntBASIC0.87□□□□□ -2.27
ACTBP60709 SNX2P2-201ENST00000424553 323 ntBASIC0.87□□□□□ -2.27
ACTBP60709 AC019205.3-201ENST00000424573 156 ntBASIC0.87□□□□□ -2.27
ACTBP60709 MTCO2P23-201ENST00000425216 680 ntBASIC0.87□□□□□ -2.27
ACTBP60709 RPL23AP95-201ENST00000426806 265 ntBASIC0.87□□□□□ -2.27
ACTBP60709 PRPS1P1-201ENST00000445305 876 ntBASIC0.87□□□□□ -2.27
ACTBP60709 AC016700.2-201ENST00000446011 156 ntBASIC0.87□□□□□ -2.27
ACTBP60709 snoU13.30-201ENST00000458951 104 ntBASIC0.87□□□□□ -2.27
ACTBP60709 AC010531.2-201ENST00000465012 153 ntBASIC0.87□□□□□ -2.27
ACTBP60709 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.87□□□□□ -2.27
ACTBP60709 AC015911.1-201ENST00000495111 156 ntBASIC0.87□□□□□ -2.27
ACTBP60709 AC116562.3-201ENST00000506136 177 ntBASIC0.87□□□□□ -2.27
ACTBP60709 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.87□□□□□ -2.27
ACTBP60709 SCARNA24.1-201ENST00000516465 137 ntBASIC0.87□□□□□ -2.27
ACTBP60709 RNU6-1220P-201ENST00000517126 108 ntBASIC0.87□□□□□ -2.27
ACTBP60709 AC109479.2-201ENST00000517842 174 ntBASIC0.87□□□□□ -2.27
ACTBP60709 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
ACTBP60709 AC068587.5-201ENST00000528506 175 ntBASIC0.87□□□□□ -2.27
ACTBP60709 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
ACTBP60709 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.87□□□□□ -2.27
ACTBP60709 AL356157.2-201ENST00000605122 111 ntBASIC0.87□□□□□ -2.27
ACTBP60709 PCGEM1.1-201ENST00000613431 131 ntBASIC0.87□□□□□ -2.27
ACTBP60709 AC009159.2-201ENST00000617603 606 ntBASIC0.87□□□□□ -2.27
ACTBP60709 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.87□□□□□ -2.27
ACTBP60709 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
ACTBP60709 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
ACTBP60709 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.86□□□□□ -2.27
ACTBP60709 AL159152.1-201ENST00000635019 2587 ntBASIC0.86□□□□□ -2.27
ACTBP60709 RNU6-862P-201ENST00000362804 105 ntBASIC0.86□□□□□ -2.27
ACTBP60709 Y_RNA.226-201ENST00000364337 114 ntBASIC0.86□□□□□ -2.27
ACTBP60709 MIR513B-201ENST00000385136 84 ntBASIC0.86□□□□□ -2.27
ACTBP60709 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
ACTBP60709 MIR1287-201ENST00000408492 90 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AL008987.1-201ENST00000415528 237 ntBASIC0.86□□□□□ -2.27
ACTBP60709 GTF2IP13-201ENST00000438487 386 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AC004854.1-201ENST00000440356 349 ntBASIC0.86□□□□□ -2.27
ACTBP60709 MTND1P18-201ENST00000448191 573 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.86□□□□□ -2.27
ACTBP60709 RPL31P3-201ENST00000458430 332 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AC087343.1-201ENST00000477341 475 ntBASIC0.86□□□□□ -2.27
ACTBP60709 RAP1BP2-201ENST00000478270 544 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.86□□□□□ -2.27
ACTBP60709 AF131216.2-201ENST00000512316 564 ntBASIC0.86□□□□□ -2.27
ACTBP60709 RNU6-377P-201ENST00000515965 102 ntBASIC0.86□□□□□ -2.27
ACTBP60709 Y_RNA.672-201ENST00000516289 104 ntBASIC0.86□□□□□ -2.27
ACTBP60709 RNU6-1098P-201ENST00000516772 96 ntBASIC0.86□□□□□ -2.27
ACTBP60709 CENPUP1-201ENST00000526649 1202 ntBASIC0.86□□□□□ -2.27
ACTBP60709 AP001893.2-201ENST00000526949 202 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms