Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 uc_338.15-201ENST00000615470 191 ntBASIC1.98□□□□□ -2.09
USP6P35125 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
USP6P35125 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USP6P35125 RNU6-1032P-201ENST00000384100 107 ntBASIC1.97□□□□□ -2.09
USP6P35125 AL606923.1-201ENST00000406616 190 ntBASIC1.97□□□□□ -2.09
USP6P35125 SNORD56-201ENST00000413522 71 ntBASIC1.97□□□□□ -2.09
USP6P35125 AL591043.1-201ENST00000432461 424 ntBASIC1.97□□□□□ -2.09
USP6P35125 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.97□□□□□ -2.09
USP6P35125 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.97□□□□□ -2.09
USP6P35125 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.97□□□□□ -2.09
USP6P35125 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.97□□□□□ -2.09
USP6P35125 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.97□□□□□ -2.09
USP6P35125 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.97□□□□□ -2.09
USP6P35125 RNU6-377P-201ENST00000515965 102 ntBASIC1.97□□□□□ -2.09
USP6P35125 RNU2-53P-201ENST00000516257 147 ntBASIC1.97□□□□□ -2.09
USP6P35125 SNORA40.12-201ENST00000516329 111 ntBASIC1.97□□□□□ -2.09
USP6P35125 AC023050.3-201ENST00000541142 333 ntBASIC1.97□□□□□ -2.09
USP6P35125 AL713866.2-201ENST00000603579 219 ntBASIC1.97□□□□□ -2.09
USP6P35125 AL136363.2-201ENST00000604173 851 ntBASIC1.97□□□□□ -2.09
USP6P35125 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.97□□□□□ -2.09
USP6P35125 RNU6-1322P-201ENST00000364309 107 ntBASIC1.96□□□□□ -2.1
USP6P35125 MIR186-201ENST00000384988 86 ntBASIC1.96□□□□□ -2.1
USP6P35125 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.96□□□□□ -2.1
USP6P35125 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.96□□□□□ -2.1
USP6P35125 AL161788.1-201ENST00000441805 169 ntBASIC1.96□□□□□ -2.1
USP6P35125 AC007969.2-201ENST00000441891 191 ntBASIC1.96□□□□□ -2.1
USP6P35125 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.96□□□□□ -2.1
USP6P35125 RNU7-167P-201ENST00000459160 62 ntBASIC1.96□□□□□ -2.1
USP6P35125 CCDC34P1-201ENST00000507441 517 ntBASIC1.96□□□□□ -2.1
USP6P35125 AC009646.1-201ENST00000510455 318 ntBASIC1.96□□□□□ -2.1
USP6P35125 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.96□□□□□ -2.1
USP6P35125 RNA5SP401-201ENST00000515920 127 ntBASIC1.96□□□□□ -2.1
USP6P35125 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.96□□□□□ -2.1
USP6P35125 AP005902.1-201ENST00000521358 186 ntBASIC1.96□□□□□ -2.1
USP6P35125 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.96□□□□□ -2.1
USP6P35125 AC245505.1-201ENST00000556398 224 ntBASIC1.96□□□□□ -2.1
USP6P35125 ANP32BP3-201ENST00000559213 706 ntBASIC1.96□□□□□ -2.1
USP6P35125 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.96□□□□□ -2.1
USP6P35125 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.96□□□□□ -2.1
USP6P35125 MIR4424-201ENST00000585257 86 ntBASIC1.96□□□□□ -2.1
USP6P35125 AC073410.2-201ENST00000603240 332 ntBASIC1.96□□□□□ -2.1
USP6P35125 AL355297.2-201ENST00000604792 129 ntBASIC1.96□□□□□ -2.1
USP6P35125 HULC.1-201ENST00000612720 240 ntBASIC1.96□□□□□ -2.1
USP6P35125 uc_338.34-201ENST00000617467 174 ntBASIC1.96□□□□□ -2.1
USP6P35125 AC097372.5-201ENST00000623665 376 ntBASIC1.96□□□□□ -2.1
USP6P35125 MIR96-201ENST00000362288 78 ntBASIC1.95□□□□□ -2.1
USP6P35125 RNU6-428P-201ENST00000362942 107 ntBASIC1.95□□□□□ -2.1
USP6P35125 RNU6-1085P-201ENST00000363576 107 ntBASIC1.95□□□□□ -2.1
USP6P35125 SNORA69-201ENST00000383895 132 ntBASIC1.95□□□□□ -2.1
USP6P35125 RNU6-342P-201ENST00000384521 104 ntBASIC1.95□□□□□ -2.1
USP6P35125 MIR544A-201ENST00000384855 91 ntBASIC1.95□□□□□ -2.1
USP6P35125 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.95□□□□□ -2.1
USP6P35125 RNU2-23P-201ENST00000410545 195 ntBASIC1.95□□□□□ -2.1
USP6P35125 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.95□□□□□ -2.1
USP6P35125 AIMP1P2-201ENST00000425294 312 ntBASIC1.95□□□□□ -2.1
USP6P35125 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.95□□□□□ -2.1
USP6P35125 AL589823.1-201ENST00000429577 183 ntBASIC1.95□□□□□ -2.1
USP6P35125 VN1R108P-201ENST00000431580 830 ntBASIC1.95□□□□□ -2.1
USP6P35125 AL121601.2-201ENST00000438019 707 ntBASIC1.95□□□□□ -2.1
USP6P35125 RNU6-261P-201ENST00000459506 102 ntBASIC1.95□□□□□ -2.1
USP6P35125 MTCO3P38-201ENST00000468910 766 ntBASIC1.95□□□□□ -2.1
USP6P35125 AC083798.1-201ENST00000472671 131 ntBASIC1.95□□□□□ -2.1
USP6P35125 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.95□□□□□ -2.1
USP6P35125 RNU1-104P-201ENST00000517280 175 ntBASIC1.95□□□□□ -2.1
USP6P35125 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
USP6P35125 AP001893.2-201ENST00000526949 202 ntBASIC1.95□□□□□ -2.1
USP6P35125 U2.17-201ENST00000611454 95 ntBASIC1.95□□□□□ -2.1
USP6P35125 AC073534.2-201ENST00000620377 381 ntBASIC1.95□□□□□ -2.1
USP6P35125 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
USP6P35125 Y_RNA.36-201ENST00000362602 112 ntBASIC1.94□□□□□ -2.1
USP6P35125 RNU6-266P-201ENST00000364225 107 ntBASIC1.94□□□□□ -2.1
USP6P35125 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.94□□□□□ -2.1
USP6P35125 Y_RNA.481-201ENST00000384373 102 ntBASIC1.94□□□□□ -2.1
USP6P35125 MIR320A-201ENST00000385302 82 ntBASIC1.94□□□□□ -2.1
USP6P35125 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.94□□□□□ -2.1
USP6P35125 RPL39P29-201ENST00000447779 157 ntBASIC1.94□□□□□ -2.1
USP6P35125 PSPHP1-201ENST00000450062 261 ntBASIC1.94□□□□□ -2.1
USP6P35125 AC087884.1-201ENST00000469738 328 ntBASIC1.94□□□□□ -2.1
USP6P35125 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.94□□□□□ -2.1
USP6P35125 RNU6-1038P-201ENST00000516516 104 ntBASIC1.94□□□□□ -2.1
USP6P35125 Z82243.1-201ENST00000609432 473 ntBASIC1.94□□□□□ -2.1
USP6P35125 AL359880.1-201ENST00000621879 266 ntBASIC1.94□□□□□ -2.1
USP6P35125 AC007792.1-201ENST00000623023 402 ntBASIC1.94□□□□□ -2.1
USP6P35125 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.94□□□□□ -2.1
USP6P35125 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USP6P35125 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.93□□□□□ -2.1
USP6P35125 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
USP6P35125 U8.1-201ENST00000362843 134 ntBASIC1.93□□□□□ -2.1
USP6P35125 RNU6-105P-201ENST00000363909 104 ntBASIC1.93□□□□□ -2.1
USP6P35125 Y_RNA.354-201ENST00000365448 111 ntBASIC1.93□□□□□ -2.1
USP6P35125 RNU1-52P-201ENST00000384190 164 ntBASIC1.93□□□□□ -2.1
USP6P35125 MIR1304-201ENST00000408243 91 ntBASIC1.93□□□□□ -2.1
USP6P35125 RNU2-63P-201ENST00000410792 194 ntBASIC1.93□□□□□ -2.1
USP6P35125 RNU6-293P-201ENST00000411259 106 ntBASIC1.93□□□□□ -2.1
USP6P35125 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.93□□□□□ -2.1
USP6P35125 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.93□□□□□ -2.1
USP6P35125 AC243964.1-201ENST00000441814 261 ntBASIC1.93□□□□□ -2.1
USP6P35125 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.93□□□□□ -2.1
USP6P35125 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.93□□□□□ -2.1
USP6P35125 MTND1P1-201ENST00000445453 368 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms