Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VARSP26640 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VARSP26640 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.45□□□□□ -1.7
VARSP26640 U3.8-201ENST00000363675 217 ntBASIC4.45□□□□□ -1.7
VARSP26640 SNORD74.4-201ENST00000364129 80 ntBASIC4.45□□□□□ -1.7
VARSP26640 SNORD113.2-201ENST00000364166 89 ntBASIC4.45□□□□□ -1.7
VARSP26640 SNORA71.2-201ENST00000364941 134 ntBASIC4.45□□□□□ -1.7
VARSP26640 SNORD18B-201ENST00000365659 72 ntBASIC4.45□□□□□ -1.7
VARSP26640 RNU6-1080P-201ENST00000383982 107 ntBASIC4.45□□□□□ -1.7
VARSP26640 HSPE1P26-201ENST00000405341 275 ntBASIC4.45□□□□□ -1.7
VARSP26640 RNA5SP129-201ENST00000410276 118 ntBASIC4.45□□□□□ -1.7
VARSP26640 AC005300.1-201ENST00000428401 373 ntBASIC4.45□□□□□ -1.7
VARSP26640 AC006028.1-201ENST00000438379 402 ntBASIC4.45□□□□□ -1.7
VARSP26640 RPS26P45-201ENST00000471748 340 ntBASIC4.45□□□□□ -1.7
VARSP26640 RN7SL41P-201ENST00000476144 297 ntBASIC4.45□□□□□ -1.7
VARSP26640 AC025445.1-201ENST00000502728 300 ntBASIC4.45□□□□□ -1.7
VARSP26640 RNU6-781P-201ENST00000516377 101 ntBASIC4.45□□□□□ -1.7
VARSP26640 RNU6-197P-201ENST00000516680 100 ntBASIC4.45□□□□□ -1.7
VARSP26640 RNU6-928P-201ENST00000516876 104 ntBASIC4.45□□□□□ -1.7
VARSP26640 IGLV3-26-201ENST00000520756 302 ntBASIC4.45□□□□□ -1.7
VARSP26640 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.45□□□□□ -1.7
VARSP26640 MIR6716-201ENST00000613413 80 ntBASIC4.45□□□□□ -1.7
VARSP26640 U3.53-201ENST00000628922 216 ntBASIC4.45□□□□□ -1.7
VARSP26640 MIR6830-201ENST00000636015 70 ntBASIC4.45□□□□□ -1.7
VARSP26640 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VARSP26640 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.45□□□□□ -1.7
VARSP26640 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.45□□□□□ -1.7
VARSP26640 OR56B2P-202ENST00000641377 2453 ntBASIC4.45□□□□□ -1.7
VARSP26640 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VARSP26640 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VARSP26640 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VARSP26640 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VARSP26640 RNU6-529P-201ENST00000363383 104 ntBASIC4.44□□□□□ -1.7
VARSP26640 RNU6-647P-201ENST00000364243 107 ntBASIC4.44□□□□□ -1.7
VARSP26640 RNU6-978P-201ENST00000364371 103 ntBASIC4.44□□□□□ -1.7
VARSP26640 MIR548B-201ENST00000385247 97 ntBASIC4.44□□□□□ -1.7
VARSP26640 RN7SKP27-201ENST00000410684 333 ntBASIC4.44□□□□□ -1.7
VARSP26640 Y_RNA.617-201ENST00000410920 90 ntBASIC4.44□□□□□ -1.7
VARSP26640 RN7SKP167-201ENST00000411047 285 ntBASIC4.44□□□□□ -1.7
VARSP26640 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.44□□□□□ -1.7
VARSP26640 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.44□□□□□ -1.7
VARSP26640 SRIP1-201ENST00000489235 288 ntBASIC4.44□□□□□ -1.7
VARSP26640 Y_RNA.690-201ENST00000516603 95 ntBASIC4.44□□□□□ -1.7
VARSP26640 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
VARSP26640 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.44□□□□□ -1.7
VARSP26640 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.44□□□□□ -1.7
VARSP26640 AC091178.1-203ENST00000584586 279 ntBASIC4.44□□□□□ -1.7
VARSP26640 MIR3199-2-201ENST00000636243 86 ntBASIC4.44□□□□□ -1.7
VARSP26640 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VARSP26640 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VARSP26640 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VARSP26640 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VARSP26640 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VARSP26640 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VARSP26640 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VARSP26640 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VARSP26640 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.43□□□□□ -1.7
VARSP26640 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VARSP26640 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VARSP26640 RNU4-15P-201ENST00000362613 141 ntBASIC4.43□□□□□ -1.7
VARSP26640 Y_RNA.124-201ENST00000363339 93 ntBASIC4.43□□□□□ -1.7
VARSP26640 AP002088.1-201ENST00000382740 395 ntBASIC4.43□□□□□ -1.7
VARSP26640 SNORA67.2-201ENST00000384300 149 ntBASIC4.43□□□□□ -1.7
VARSP26640 U8.12-201ENST00000384701 133 ntBASIC4.43□□□□□ -1.7
VARSP26640 MIR513A2-201ENST00000385249 127 ntBASIC4.43□□□□□ -1.7
VARSP26640 RPS26P28-201ENST00000470806 348 ntBASIC4.43□□□□□ -1.7
VARSP26640 AC131055.1-201ENST00000584626 316 ntBASIC4.43□□□□□ -1.7
VARSP26640 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.43□□□□□ -1.7
VARSP26640 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.43□□□□□ -1.7
VARSP26640 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.43□□□□□ -1.7
VARSP26640 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VARSP26640 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
VARSP26640 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VARSP26640 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VARSP26640 AL672296.1-201ENST00000427780 2158 ntBASIC4.43□□□□□ -1.7
VARSP26640 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARSP26640 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARSP26640 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VARSP26640 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARSP26640 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VARSP26640 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARSP26640 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VARSP26640 AC021146.4-201ENST00000309229 279 ntBASIC4.42□□□□□ -1.7
VARSP26640 Y_RNA.346-201ENST00000365385 112 ntBASIC4.42□□□□□ -1.7
VARSP26640 RNU6-136P-201ENST00000384663 107 ntBASIC4.42□□□□□ -1.7
VARSP26640 RNA5SP397-201ENST00000391323 118 ntBASIC4.42□□□□□ -1.7
VARSP26640 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VARSP26640 U6atac.2-201ENST00000408644 118 ntBASIC4.42□□□□□ -1.7
VARSP26640 RPL23AP1-201ENST00000428990 471 ntBASIC4.42□□□□□ -1.7
VARSP26640 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.42□□□□□ -1.7
VARSP26640 HMGN2P20-201ENST00000437531 273 ntBASIC4.42□□□□□ -1.7
VARSP26640 AL161651.1-201ENST00000440882 223 ntBASIC4.42□□□□□ -1.7
VARSP26640 AL358232.1-201ENST00000448030 501 ntBASIC4.42□□□□□ -1.7
VARSP26640 RN7SKP19-201ENST00000516016 252 ntBASIC4.42□□□□□ -1.7
VARSP26640 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.42□□□□□ -1.7
VARSP26640 AC100770.1-201ENST00000532310 322 ntBASIC4.42□□□□□ -1.7
VARSP26640 POLR3GP1-201ENST00000594073 261 ntBASIC4.42□□□□□ -1.7
VARSP26640 AP003357.1-201ENST00000604497 148 ntBASIC4.42□□□□□ -1.7
VARSP26640 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.42□□□□□ -1.7
VARSP26640 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms