Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF40O75150 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF40O75150 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
RNF40O75150 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF40O75150 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF40O75150 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.83□□□□□ -1.64
RNF40O75150 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF40O75150 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
RNF40O75150 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF40O75150 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RNF40O75150 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF40O75150 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RNF40O75150 OR56B2P-202ENST00000641377 2453 ntBASIC4.82□□□□□ -1.64
RNF40O75150 AC007656.2-201ENST00000624902 4547 ntBASIC4.82□□□□□ -1.64
RNF40O75150 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF40O75150 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF40O75150 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF40O75150 Y_RNA.40-201ENST00000362645 93 ntBASIC4.82□□□□□ -1.64
RNF40O75150 RNA5SP151-201ENST00000365632 117 ntBASIC4.82□□□□□ -1.64
RNF40O75150 SNORA51.5-201ENST00000384126 131 ntBASIC4.82□□□□□ -1.64
RNF40O75150 RNU6-1181P-201ENST00000384191 106 ntBASIC4.82□□□□□ -1.64
RNF40O75150 SNORD12C-201ENST00000386307 89 ntBASIC4.82□□□□□ -1.64
RNF40O75150 RNA5SP39-201ENST00000411245 120 ntBASIC4.82□□□□□ -1.64
RNF40O75150 HLA-N-201ENST00000437516 135 ntBASIC4.82□□□□□ -1.64
RNF40O75150 AC012308.1-201ENST00000451232 178 ntBASIC4.82□□□□□ -1.64
RNF40O75150 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.82□□□□□ -1.64
RNF40O75150 RNA5SP153-201ENST00000516498 76 ntBASIC4.82□□□□□ -1.64
RNF40O75150 RNU1-104P-201ENST00000517280 175 ntBASIC4.82□□□□□ -1.64
RNF40O75150 IFITM8P-201ENST00000522529 394 ntBASIC4.82□□□□□ -1.64
RNF40O75150 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.82□□□□□ -1.64
RNF40O75150 AC007012.1-201ENST00000567192 175 ntBASIC4.82□□□□□ -1.64
RNF40O75150 AC024220.1-201ENST00000603675 484 ntBASIC4.82□□□□□ -1.64
RNF40O75150 AL022345.2-201ENST00000606307 135 ntBASIC4.82□□□□□ -1.64
RNF40O75150 AC068724.3-201ENST00000625906 87 ntBASIC4.82□□□□□ -1.64
RNF40O75150 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RNF40O75150 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF40O75150 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF40O75150 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF40O75150 AC027290.2-201ENST00000623210 18662 ntBASIC4.82□□□□□ -1.64
RNF40O75150 RNU4-15P-201ENST00000362613 141 ntBASIC4.81□□□□□ -1.64
RNF40O75150 MIR873-201ENST00000401120 77 ntBASIC4.81□□□□□ -1.64
RNF40O75150 MIR891A-201ENST00000401237 79 ntBASIC4.81□□□□□ -1.64
RNF40O75150 MIR1193-201ENST00000408109 78 ntBASIC4.81□□□□□ -1.64
RNF40O75150 RN7SKP267-201ENST00000410381 285 ntBASIC4.81□□□□□ -1.64
RNF40O75150 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF40O75150 AC109327.1-201ENST00000471666 403 ntBASIC4.81□□□□□ -1.64
RNF40O75150 AC015795.1-201ENST00000513669 327 ntBASIC4.81□□□□□ -1.64
RNF40O75150 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.81□□□□□ -1.64
RNF40O75150 RN7SKP43-201ENST00000516173 320 ntBASIC4.81□□□□□ -1.64
RNF40O75150 RN7SKP12-201ENST00000516275 143 ntBASIC4.81□□□□□ -1.64
RNF40O75150 SNORA40.13-201ENST00000516379 120 ntBASIC4.81□□□□□ -1.64
RNF40O75150 RN7SKP21-201ENST00000516503 220 ntBASIC4.81□□□□□ -1.64
RNF40O75150 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF40O75150 AC074050.1-201ENST00000563247 211 ntBASIC4.81□□□□□ -1.64
RNF40O75150 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF40O75150 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF40O75150 AL133243.3-201ENST00000617415 3004 ntBASIC4.81□□□□□ -1.64
RNF40O75150 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF40O75150 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF40O75150 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF40O75150 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF40O75150 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF40O75150 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF40O75150 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
RNF40O75150 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF40O75150 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
RNF40O75150 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RNF40O75150 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF40O75150 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF40O75150 Y_RNA.91-201ENST00000363042 107 ntBASIC4.8□□□□□ -1.64
RNF40O75150 RNA5SP22-201ENST00000365393 109 ntBASIC4.8□□□□□ -1.64
RNF40O75150 Y_RNA.549-201ENST00000384657 102 ntBASIC4.8□□□□□ -1.64
RNF40O75150 AL135786.1-201ENST00000415892 214 ntBASIC4.8□□□□□ -1.64
RNF40O75150 EDDM3CP-201ENST00000415977 425 ntBASIC4.8□□□□□ -1.64
RNF40O75150 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF40O75150 snoU13.14-201ENST00000459372 104 ntBASIC4.8□□□□□ -1.64
RNF40O75150 AC010618.1-201ENST00000469924 477 ntBASIC4.8□□□□□ -1.64
RNF40O75150 SRIP1-201ENST00000489235 288 ntBASIC4.8□□□□□ -1.64
RNF40O75150 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF40O75150 RNU6-1299P-201ENST00000516316 100 ntBASIC4.8□□□□□ -1.64
RNF40O75150 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF40O75150 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF40O75150 POLR3GP1-201ENST00000594073 261 ntBASIC4.8□□□□□ -1.64
RNF40O75150 MIR6716-201ENST00000613413 80 ntBASIC4.8□□□□□ -1.64
RNF40O75150 AL442128.1-201ENST00000615151 90 ntBASIC4.8□□□□□ -1.64
RNF40O75150 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF40O75150 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF40O75150 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF40O75150 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF40O75150 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF40O75150 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF40O75150 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF40O75150 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RNF40O75150 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF40O75150 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF40O75150 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF40O75150 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF40O75150 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNF40O75150 RNA5SP509-201ENST00000364577 119 ntBASIC4.79□□□□□ -1.64
RNF40O75150 SNORA71.2-201ENST00000364941 134 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms