Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 UNC93B5-201ENST00000530315 699 ntBASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 AC141586.3-201ENST00000562166 1838 ntBASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.18■□□□□ 0.5
AP4B1Q9Y6B7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 AC023632.3-201ENST00000521633 145 ntBASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AP4B1Q9Y6B7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 AL390719.1-204ENST00000412397 1219 ntBASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.16■□□□□ 0.5
AP4B1Q9Y6B7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 TEX21P-204ENST00000641479 1693 ntBASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.15■□□□□ 0.5
AP4B1Q9Y6B7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms