Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 RPS2P55-201ENST00000397318 883 ntBASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 AC107956.1-201ENST00000494359 873 ntBASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 LINC01023-201ENST00000606054 436 ntBASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 AC104417.2-201ENST00000562989 1793 ntBASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 AL354751.1-201ENST00000412768 1863 ntBASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LSM4Q9Y4Z0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 AC133681.1-201ENST00000465482 601 ntBASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 SDHAP1-207ENST00000440850 2000 ntBASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 KRT17P2-201ENST00000300992 1314 ntBASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LSM4Q9Y4Z0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 MIR1224-201ENST00000408193 85 ntBASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 BX088651.1-201ENST00000540551 451 ntBASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 AC124016.1-201ENST00000609552 612 ntBASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LSM4Q9Y4Z0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LSM4Q9Y4Z0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms