Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 TFP1-202ENST00000475455 1573 ntBASIC17.92■□□□□ 0.46
LHX6Q9UPM6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 LINC00265-3P-201ENST00000447588 903 ntBASIC17.92■□□□□ 0.46
LHX6Q9UPM6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 KRT8P26-201ENST00000534154 1276 ntBASIC17.92■□□□□ 0.46
LHX6Q9UPM6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 AC064862.7-201ENST00000604520 867 ntBASIC17.92■□□□□ 0.46
LHX6Q9UPM6 AC026790.2-201ENST00000606282 430 ntBASIC17.92■□□□□ 0.46
LHX6Q9UPM6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 HLA-A-209ENST00000638375 975 ntBASIC17.92■□□□□ 0.46
LHX6Q9UPM6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
LHX6Q9UPM6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 FP700111.2-201ENST00000619190 1892 ntBASIC17.91■□□□□ 0.46
LHX6Q9UPM6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LHX6Q9UPM6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 AC018553.1-201ENST00000616682 1458 ntBASIC17.9■□□□□ 0.46
LHX6Q9UPM6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 AC092597.1-201ENST00000487352 616 ntBASIC17.9■□□□□ 0.46
LHX6Q9UPM6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 AC012615.1-201ENST00000565797 1299 ntBASIC17.9■□□□□ 0.46
LHX6Q9UPM6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LHX6Q9UPM6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
LHX6Q9UPM6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.89■□□□□ 0.46
LHX6Q9UPM6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
LHX6Q9UPM6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms