Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 AL691432.2-201ENST00000607222 2038 ntBASIC16.64■□□□□ 0.25
DUX4Q9UBX2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DUX4Q9UBX2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 AL390719.1-204ENST00000412397 1219 ntBASIC16.63■□□□□ 0.25
DUX4Q9UBX2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 AP003097.1-201ENST00000530657 1135 ntBASIC16.63■□□□□ 0.25
DUX4Q9UBX2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DUX4Q9UBX2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 HLA-G-202ENST00000376815 851 ntBASIC16.62■□□□□ 0.25
DUX4Q9UBX2 HLA-G-203ENST00000376818 1127 ntBASIC16.62■□□□□ 0.25
DUX4Q9UBX2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 ESRRAP1-201ENST00000400596 1257 ntBASIC16.62■□□□□ 0.25
DUX4Q9UBX2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 UNC93B4-201ENST00000505679 747 ntBASIC16.62■□□□□ 0.25
DUX4Q9UBX2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.62■□□□□ 0.25
DUX4Q9UBX2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms