Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE7Q9UBL6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.4■□□□□ 0.54
CPNE7Q9UBL6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.4■□□□□ 0.54
CPNE7Q9UBL6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.4■□□□□ 0.54
CPNE7Q9UBL6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CPNE7Q9UBL6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CPNE7Q9UBL6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.39■□□□□ 0.54
CPNE7Q9UBL6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.39■□□□□ 0.54
CPNE7Q9UBL6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CPNE7Q9UBL6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 TSPY5P-201ENST00000426936 936 ntBASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 LINC01238-205ENST00000567549 1107 ntBASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 AC011558.1-201ENST00000623459 338 ntBASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 KRT8P3-201ENST00000519669 1449 ntBASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CPNE7Q9UBL6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 GPAT2P1-201ENST00000444924 1672 ntBASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.38■□□□□ 0.53
CPNE7Q9UBL6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 AP000523.1-201ENST00000398242 1049 ntBASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 AC009947.2-201ENST00000444014 672 ntBASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 AL023973.1-201ENST00000624619 620 ntBASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CPNE7Q9UBL6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE7Q9UBL6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE7Q9UBL6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE7Q9UBL6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE7Q9UBL6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE7Q9UBL6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CPNE7Q9UBL6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE7Q9UBL6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE7Q9UBL6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms