Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 AC012618.2-201ENST00000428058 849 ntBASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 MIR4497-201ENST00000583208 89 ntBASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 AC233702.5-201ENST00000584107 538 ntBASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAP1Q9NZP6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 AC090164.3-201ENST00000610780 2143 ntBASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 BICD1-207ENST00000551848 1962 ntBASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 AC139713.2-201ENST00000641328 2723 ntBASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.24■□□□□ 0.35
NPAP1Q9NZP6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 RARRES2P10-201ENST00000564312 460 ntBASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAP1Q9NZP6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 KRT16P6-202ENST00000425692 1426 ntBASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAP1Q9NZP6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms