Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 KRT18P29-201ENST00000397031 1267 ntBASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 AC069544.1-201ENST00000609399 999 ntBASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 ITM2C-210ENST00000620962 501 ntBASIC15.77■□□□□ 0.12
LIN7CQ9NUP9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIN7CQ9NUP9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.77■□□□□ 0.11
LIN7CQ9NUP9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIN7CQ9NUP9 AC104417.2-201ENST00000562989 1793 ntBASIC15.77■□□□□ 0.11
LIN7CQ9NUP9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIN7CQ9NUP9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.77■□□□□ 0.11
LIN7CQ9NUP9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 ABHD17AP1-201ENST00000358206 933 ntBASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 YBX1P10-201ENST00000444752 975 ntBASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 PRKY-204ENST00000533551 1019 ntBASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 KRT8P8-201ENST00000434750 1448 ntBASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 AC090164.3-201ENST00000610780 2143 ntBASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIN7CQ9NUP9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 AP006587.1-201ENST00000534129 1502 ntBASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 AC128676.1-201ENST00000454392 318 ntBASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 AC073648.6-201ENST00000641589 218 ntBASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 WIZP1-201ENST00000531444 2299 ntBASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 SDHAP1-207ENST00000440850 2000 ntBASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.75■□□□□ 0.11
LIN7CQ9NUP9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 PKD1P1-201ENST00000458669 6805 ntBASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LIN7CQ9NUP9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms