Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.14■□□□□ 0.33
HINT3Q9NQE9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.13■□□□□ 0.33
HINT3Q9NQE9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 AC008403.3-201ENST00000598924 454 ntBASIC17.13■□□□□ 0.33
HINT3Q9NQE9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 AL133373.2-201ENST00000623187 2828 ntBASIC17.13■□□□□ 0.33
HINT3Q9NQE9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HINT3Q9NQE9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 KRT17P3-201ENST00000420566 1262 ntBASIC17.12■□□□□ 0.33
HINT3Q9NQE9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 AC008687.6-201ENST00000596318 630 ntBASIC17.12■□□□□ 0.33
HINT3Q9NQE9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HINT3Q9NQE9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 AC128676.1-201ENST00000454392 318 ntBASIC17.11■□□□□ 0.33
HINT3Q9NQE9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 AC120498.8-201ENST00000614275 531 ntBASIC17.11■□□□□ 0.33
HINT3Q9NQE9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.11■□□□□ 0.33
HINT3Q9NQE9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms