Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRTM1Q9HBL6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 AL023875.1-201ENST00000640777 796 ntBASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.24■□□□□ 0.51
LRTM1Q9HBL6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 ANO7L1-203ENST00000602586 1720 ntBASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 AC005082.1-201ENST00000413042 2259 ntBASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 KRASP1-201ENST00000407852 552 ntBASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 AC239809.2-201ENST00000415381 517 ntBASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 KRT8P41-201ENST00000533985 1514 ntBASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRTM1Q9HBL6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRTM1Q9HBL6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 KRT16P5-201ENST00000455284 522 ntBASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms