Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.22■□□□□ 0.83
SYNCQ9H7C4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SYNCQ9H7C4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.22■□□□□ 0.83
SYNCQ9H7C4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SYNCQ9H7C4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 AC012618.2-201ENST00000428058 849 ntBASIC20.21■□□□□ 0.83
SYNCQ9H7C4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 AC026271.3-201ENST00000571884 352 ntBASIC20.21■□□□□ 0.83
SYNCQ9H7C4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 AP006294.2-201ENST00000641667 209 ntBASIC20.21■□□□□ 0.83
SYNCQ9H7C4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 KRT8P41-201ENST00000533985 1514 ntBASIC20.21■□□□□ 0.83
SYNCQ9H7C4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.21■□□□□ 0.83
SYNCQ9H7C4 IRX1P1-201ENST00000438849 1838 ntBASIC20.2■□□□□ 0.82
SYNCQ9H7C4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 MIR718-201ENST00000390190 70 ntBASIC20.2■□□□□ 0.82
SYNCQ9H7C4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.2■□□□□ 0.82
SYNCQ9H7C4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SYNCQ9H7C4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 AC004951.3-201ENST00000418645 1148 ntBASIC20.19■□□□□ 0.82
SYNCQ9H7C4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 AC233702.5-201ENST00000584107 538 ntBASIC20.19■□□□□ 0.82
SYNCQ9H7C4 RCC2P6-201ENST00000526625 1557 ntBASIC20.19■□□□□ 0.82
SYNCQ9H7C4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 FP475955.4-201ENST00000623131 1990 ntBASIC20.19■□□□□ 0.82
SYNCQ9H7C4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SYNCQ9H7C4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 AC008550.1-201ENST00000511500 884 ntBASIC20.18■□□□□ 0.82
SYNCQ9H7C4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 AC011298.2-201ENST00000617989 482 ntBASIC20.18■□□□□ 0.82
SYNCQ9H7C4 AL049637.2-201ENST00000641778 930 ntBASIC20.18■□□□□ 0.82
SYNCQ9H7C4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms