Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.56■□□□□ 0.88
NUCKS1Q9H1E3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 AC135050.7-201ENST00000624508 2218 ntBASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUCKS1Q9H1E3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 C1QL1P1-201ENST00000568105 661 ntBASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 AC004264.1-201ENST00000608354 794 ntBASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 AC066615.1-201ENST00000640911 628 ntBASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 AC104581.1-202ENST00000635932 2618 ntBASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUCKS1Q9H1E3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 ANO7L1-203ENST00000602586 1720 ntBASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 AC239809.2-201ENST00000415381 517 ntBASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 NBPF21P-201ENST00000425093 1451 ntBASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NUCKS1Q9H1E3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms