Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX47Q9H0S4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
DDX47Q9H0S4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.77■□□□□ 0.75
DDX47Q9H0S4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.77■□□□□ 0.75
DDX47Q9H0S4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
DDX47Q9H0S4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 AC092368.3-202ENST00000574180 1591 ntBASIC19.76■□□□□ 0.75
DDX47Q9H0S4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX47Q9H0S4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.75■□□□□ 0.75
DDX47Q9H0S4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 AC092118.2-201ENST00000613495 667 ntBASIC19.75■□□□□ 0.75
DDX47Q9H0S4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX47Q9H0S4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 CROCCP5-201ENST00000436658 830 ntBASIC19.74■□□□□ 0.75
DDX47Q9H0S4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.74■□□□□ 0.75
DDX47Q9H0S4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX47Q9H0S4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.73■□□□□ 0.75
DDX47Q9H0S4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 AC026185.1-201ENST00000445748 174 ntBASIC19.73■□□□□ 0.75
DDX47Q9H0S4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.73■□□□□ 0.75
DDX47Q9H0S4 MIR5787-201ENST00000611784 55 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms