Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL121757.2-201ENST00000611223 313 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 DUX4L23-201ENST00000615195 1269 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 DUX4L24-201ENST00000617576 1269 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC01971-201ENST00000617888 1048 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 DUX4L22-201ENST00000618238 1269 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 DUX4L20-201ENST00000619712 1269 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 DUX4L21-201ENST00000622058 1269 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 DUX4L10-201ENST00000622460 1267 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 DUX4L25-201ENST00000624915 1269 ntBASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC11.76□□□□□ -0.53
KRTAP3-3Q9BYR6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AL359258.2-201ENST00000564063 1566 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 EED-207ENST00000528180 1745 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 RNU4-75P-201ENST00000364621 146 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AL133325.1-201ENST00000421090 382 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 SNRPEP8-201ENST00000442866 260 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 Z73417.1-201ENST00000447373 778 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 MTND1P18-201ENST00000448191 573 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AMD1P1-201ENST00000457220 922 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 SOX5P1-201ENST00000524155 1127 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 OR8Q1P-201ENST00000526467 655 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AL352979.3-201ENST00000553515 247 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AC024270.2-201ENST00000568441 499 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 WBP1LP11-201ENST00000586141 328 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 ZFP14-202ENST00000589280 642 ntTSL 3 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 INTS6-AS1-204ENST00000593709 648 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AC010678.1-201ENST00000614118 713 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 WBP1LP8-201ENST00000617401 327 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AC105020.6-201ENST00000621523 1217 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 AC092139.3-201ENST00000624764 968 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 NPC2-203ENST00000541064 1436 ntTSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 ECM1P2-201ENST00000503354 1577 ntBASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
KRTAP3-3Q9BYR6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 SLC6A10P-202ENST00000431994 2058 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC01124-201ENST00000409786 2117 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 SH2D1A-201ENST00000360027 593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 RBMY2YP-201ENST00000423333 912 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 RBMY2WP-201ENST00000424230 894 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AL137013.1-201ENST00000432946 1228 ntBASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AL109754.1-201ENST00000449270 1036 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC002463.1-201ENST00000453459 1188 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AL161785.1-201ENST00000455981 583 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 LINC01331-201ENST00000507781 568 ntTSL 4 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC11.74□□□□□ -0.53
KRTAP3-3Q9BYR6 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms