Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CPNE1Q99829 AP003097.1-201ENST00000530657 1135 ntBASIC18.97■□□□□ 0.63
CPNE1Q99829 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE1Q99829 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.97■□□□□ 0.63
CPNE1Q99829 AC092666.2-201ENST00000613287 246 ntBASIC18.97■□□□□ 0.63
CPNE1Q99829 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CPNE1Q99829 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CPNE1Q99829 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.97■□□□□ 0.63
CPNE1Q99829 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE1Q99829 BICD1-207ENST00000551848 1962 ntBASIC18.97■□□□□ 0.63
CPNE1Q99829 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE1Q99829 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE1Q99829 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE1Q99829 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE1Q99829 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.96■□□□□ 0.63
CPNE1Q99829 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
CPNE1Q99829 KRT8P41-201ENST00000533985 1514 ntBASIC18.96■□□□□ 0.63
CPNE1Q99829 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE1Q99829 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CPNE1Q99829 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE1Q99829 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPNE1Q99829 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE1Q99829 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 AL355802.2-201ENST00000402069 882 ntBASIC18.96■□□□□ 0.63
CPNE1Q99829 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE1Q99829 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.96■□□□□ 0.63
CPNE1Q99829 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.96■□□□□ 0.63
CPNE1Q99829 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.96■□□□□ 0.63
CPNE1Q99829 AC069544.1-201ENST00000609399 999 ntBASIC18.96■□□□□ 0.63
CPNE1Q99829 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
CPNE1Q99829 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.96■□□□□ 0.63
CPNE1Q99829 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 AC007613.1-201ENST00000572811 2597 ntBASIC18.96■□□□□ 0.63
CPNE1Q99829 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE1Q99829 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.95■□□□□ 0.62
CPNE1Q99829 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CPNE1Q99829 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE1Q99829 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CPNE1Q99829 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.95■□□□□ 0.62
CPNE1Q99829 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CPNE1Q99829 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.95■□□□□ 0.62
CPNE1Q99829 AC090192.1-201ENST00000517740 490 ntBASIC18.95■□□□□ 0.62
CPNE1Q99829 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE1Q99829 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.95■□□□□ 0.62
CPNE1Q99829 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.95■□□□□ 0.62
CPNE1Q99829 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CPNE1Q99829 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.95■□□□□ 0.62
CPNE1Q99829 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE1Q99829 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CPNE1Q99829 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CPNE1Q99829 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE1Q99829 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.95■□□□□ 0.62
CPNE1Q99829 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE1Q99829 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE1Q99829 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE1Q99829 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE1Q99829 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.94■□□□□ 0.62
CPNE1Q99829 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE1Q99829 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.94■□□□□ 0.62
CPNE1Q99829 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.94■□□□□ 0.62
CPNE1Q99829 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE1Q99829 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CPNE1Q99829 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms