Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS1Q99742 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS1Q99742 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NPAS1Q99742 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS1Q99742 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NPAS1Q99742 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.28■□□□□ 0.36
NPAS1Q99742 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPAS1Q99742 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.28■□□□□ 0.36
NPAS1Q99742 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAS1Q99742 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAS1Q99742 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.27■□□□□ 0.36
NPAS1Q99742 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.27■□□□□ 0.36
NPAS1Q99742 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAS1Q99742 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NPAS1Q99742 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.27■□□□□ 0.36
NPAS1Q99742 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NPAS1Q99742 CRYGFP-201ENST00000418459 633 ntBASIC17.27■□□□□ 0.36
NPAS1Q99742 MFAP1P1-201ENST00000442257 1255 ntBASIC17.27■□□□□ 0.36
NPAS1Q99742 BX088651.1-201ENST00000540551 451 ntBASIC17.27■□□□□ 0.36
NPAS1Q99742 CKBP1-201ENST00000565489 1086 ntBASIC17.27■□□□□ 0.36
NPAS1Q99742 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NPAS1Q99742 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NPAS1Q99742 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NPAS1Q99742 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS1Q99742 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.27■□□□□ 0.35
NPAS1Q99742 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS1Q99742 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
NPAS1Q99742 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NPAS1Q99742 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS1Q99742 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS1Q99742 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NPAS1Q99742 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.26■□□□□ 0.35
NPAS1Q99742 CYP2D8P-201ENST00000433633 1490 ntBASIC17.26■□□□□ 0.35
NPAS1Q99742 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS1Q99742 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS1Q99742 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NPAS1Q99742 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
NPAS1Q99742 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS1Q99742 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 TSPY21P-201ENST00000433481 731 ntBASIC17.26■□□□□ 0.35
NPAS1Q99742 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.26■□□□□ 0.35
NPAS1Q99742 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS1Q99742 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS1Q99742 DGCR10-201ENST00000609839 495 ntBASIC17.26■□□□□ 0.35
NPAS1Q99742 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS1Q99742 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS1Q99742 AC098818.2-201ENST00000564925 2320 ntBASIC17.26■□□□□ 0.35
NPAS1Q99742 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NPAS1Q99742 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.26■□□□□ 0.35
NPAS1Q99742 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NPAS1Q99742 AC096733.2-201ENST00000609937 1394 ntBASIC17.26■□□□□ 0.35
NPAS1Q99742 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.26■□□□□ 0.35
NPAS1Q99742 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
NPAS1Q99742 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
NPAS1Q99742 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
NPAS1Q99742 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS1Q99742 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS1Q99742 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS1Q99742 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAS1Q99742 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.25■□□□□ 0.35
NPAS1Q99742 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.25■□□□□ 0.35
NPAS1Q99742 FITM1-202ENST00000559294 800 ntBASIC17.25■□□□□ 0.35
NPAS1Q99742 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS1Q99742 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms