Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 HLA-F-220ENST00000434407 884 ntBASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 DRAXINP1-201ENST00000437611 948 ntBASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 KRT8P26-201ENST00000534154 1276 ntBASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 AC139530.3-201ENST00000620344 690 ntBASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 AL162741.1-201ENST00000565563 1558 ntBASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC24.38■■□□□ 1.49
TUBGCP6Q96RT7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TUBGCP6Q96RT7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
TUBGCP6Q96RT7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
TUBGCP6Q96RT7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TUBGCP6Q96RT7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TUBGCP6Q96RT7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.37■■□□□ 1.49
TUBGCP6Q96RT7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC24.37■■□□□ 1.49
TUBGCP6Q96RT7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TUBGCP6Q96RT7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TUBGCP6Q96RT7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 TP73-AS1-207ENST00000624167 988 ntBASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.36■■□□□ 1.49
TUBGCP6Q96RT7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 SEC1P-202ENST00000473944 940 ntBASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 TOB2P1-201ENST00000469761 992 ntBASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 RNA5SP419-201ENST00000515908 135 ntBASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.35■■□□□ 1.49
TUBGCP6Q96RT7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 AKR1C7P-201ENST00000305623 895 ntBASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 AC079602.3-201ENST00000623931 403 ntBASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
TUBGCP6Q96RT7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 AC138894.3-201ENST00000603787 634 ntBASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TUBGCP6Q96RT7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms