Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 RFPL4AP1-201ENST00000530883 850 ntBASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.14■□□□□ 0.17
CSMD1Q96PZ7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 RPL13AP23-201ENST00000480739 586 ntBASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 AC139887.3-201ENST00000568585 713 ntBASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 IGHV3-22-201ENST00000520721 359 ntBASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 TMEM179-206ENST00000616017 1645 ntBASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CSMD1Q96PZ7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 HLA-J-203ENST00000494367 1087 ntBASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 AL390719.2-201ENST00000606993 987 ntBASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 AC134684.3-201ENST00000641758 218 ntBASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 AC036111.1-201ENST00000533973 1582 ntBASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 AC079602.3-201ENST00000623931 403 ntBASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 AL512408.1-201ENST00000569378 2000 ntBASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CSMD1Q96PZ7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 CYMP-203ENST00000474680 1263 ntBASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 TP73-AS1-207ENST00000624167 988 ntBASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 AC093525.10-201ENST00000625130 1569 ntBASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSMD1Q96PZ7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms