Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.07■□□□□ 0.8
CALR3Q96L12 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.06■□□□□ 0.8
CALR3Q96L12 AC073592.3-201ENST00000625118 1834 ntBASIC20.06■□□□□ 0.8
CALR3Q96L12 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CALR3Q96L12 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CALR3Q96L12 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CALR3Q96L12 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.06■□□□□ 0.8
CALR3Q96L12 TSPY23P-201ENST00000440136 739 ntBASIC20.06■□□□□ 0.8
CALR3Q96L12 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CALR3Q96L12 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.06■□□□□ 0.8
CALR3Q96L12 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.06■□□□□ 0.8
CALR3Q96L12 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.06■□□□□ 0.8
CALR3Q96L12 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.06■□□□□ 0.8
CALR3Q96L12 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.06■□□□□ 0.8
CALR3Q96L12 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.06■□□□□ 0.8
CALR3Q96L12 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CALR3Q96L12 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CALR3Q96L12 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CALR3Q96L12 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 NOC2LP1-202ENST00000452600 2235 ntBASIC20.05■□□□□ 0.8
CALR3Q96L12 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CALR3Q96L12 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.05■□□□□ 0.8
CALR3Q96L12 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.05■□□□□ 0.8
CALR3Q96L12 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.05■□□□□ 0.8
CALR3Q96L12 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 AC142086.2-201ENST00000569753 217 ntBASIC20.05■□□□□ 0.8
CALR3Q96L12 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.05■□□□□ 0.8
CALR3Q96L12 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.05■□□□□ 0.8
CALR3Q96L12 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.05■□□□□ 0.8
CALR3Q96L12 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CALR3Q96L12 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CALR3Q96L12 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.04■□□□□ 0.8
CALR3Q96L12 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.04■□□□□ 0.8
CALR3Q96L12 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CALR3Q96L12 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CALR3Q96L12 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CALR3Q96L12 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CALR3Q96L12 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.04■□□□□ 0.8
CALR3Q96L12 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CALR3Q96L12 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.04■□□□□ 0.8
CALR3Q96L12 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CALR3Q96L12 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CALR3Q96L12 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CALR3Q96L12 AL162741.1-201ENST00000565563 1558 ntBASIC20.04■□□□□ 0.8
CALR3Q96L12 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.03■□□□□ 0.8
CALR3Q96L12 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.03■□□□□ 0.8
CALR3Q96L12 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CALR3Q96L12 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CALR3Q96L12 LTB4R2-202ENST00000528054 3092 ntBASIC20.03■□□□□ 0.8
CALR3Q96L12 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.03■□□□□ 0.8
CALR3Q96L12 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.03■□□□□ 0.8
CALR3Q96L12 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 UNC93B5-201ENST00000530315 699 ntBASIC20.03■□□□□ 0.8
CALR3Q96L12 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.03■□□□□ 0.8
CALR3Q96L12 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.03■□□□□ 0.8
CALR3Q96L12 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.03■□□□□ 0.8
CALR3Q96L12 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CALR3Q96L12 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.03■□□□□ 0.8
CALR3Q96L12 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms