Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.06■□□□□ 0.16
SPG11Q96JI7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPG11Q96JI7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.05■□□□□ 0.16
SPG11Q96JI7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 POLD2P1-201ENST00000511220 997 ntBASIC16.05■□□□□ 0.16
SPG11Q96JI7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.05■□□□□ 0.16
SPG11Q96JI7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.05■□□□□ 0.16
SPG11Q96JI7 AL136038.4-201ENST00000603606 1261 ntBASIC16.05■□□□□ 0.16
SPG11Q96JI7 Z83836.1-201ENST00000624605 1642 ntBASIC16.05■□□□□ 0.16
SPG11Q96JI7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
SPG11Q96JI7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SPG11Q96JI7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 FOSL1P1-201ENST00000511041 816 ntBASIC16.05■□□□□ 0.16
SPG11Q96JI7 AC092865.5-201ENST00000545435 363 ntBASIC16.05■□□□□ 0.16
SPG11Q96JI7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.05■□□□□ 0.16
SPG11Q96JI7 AL139424.1-201ENST00000607572 797 ntBASIC16.05■□□□□ 0.16
SPG11Q96JI7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPG11Q96JI7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 AC104819.1-201ENST00000504587 486 ntBASIC16.04■□□□□ 0.16
SPG11Q96JI7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 AC074051.2-201ENST00000565115 352 ntBASIC16.04■□□□□ 0.16
SPG11Q96JI7 AC138894.3-201ENST00000603787 634 ntBASIC16.04■□□□□ 0.16
SPG11Q96JI7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPG11Q96JI7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SPG11Q96JI7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 IL9RP2-201ENST00000423948 1312 ntBASIC16.03■□□□□ 0.16
SPG11Q96JI7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms