Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 ZNF815P-204ENST00000434898 1737 ntBASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 HLA-F-220ENST00000434407 884 ntBASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 EMBP1-201ENST00000458200 901 ntBASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 MIR3180-5-201ENST00000583743 153 ntBASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SNRNP40Q96DI7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 TSPY19P-201ENST00000418461 509 ntBASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 TSPY22P-201ENST00000427496 604 ntBASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 TSPY18P-201ENST00000441642 509 ntBASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 MCCD1P1-208ENST00000445732 328 ntBASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 AC009078.2-202ENST00000463353 338 ntBASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 AL732292.2-201ENST00000609649 430 ntBASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 AL157888.1-201ENST00000631930 593 ntBASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNRNP40Q96DI7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 AL136038.4-201ENST00000603606 1261 ntBASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
SNRNP40Q96DI7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SNRNP40Q96DI7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms