Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 Z83836.1-201ENST00000624605 1642 ntBASIC24.25■■□□□ 1.47
SMARCC1Q92922 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 AP002469.2-201ENST00000531724 424 ntBASIC24.25■■□□□ 1.47
SMARCC1Q92922 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 AL662844.1-201ENST00000546340 181 ntBASIC24.25■■□□□ 1.47
SMARCC1Q92922 BMF-207ENST00000559701 630 ntTSL 3 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
SMARCC1Q92922 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SMARCC1Q92922 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMARCC1Q92922 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMARCC1Q92922 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMARCC1Q92922 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SMARCC1Q92922 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMARCC1Q92922 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMARCC1Q92922 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SMARCC1Q92922 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 SLC25A6P4-201ENST00000586535 553 ntBASIC24.24■■□□□ 1.47
SMARCC1Q92922 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SMARCC1Q92922 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SMARCC1Q92922 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
SMARCC1Q92922 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMARCC1Q92922 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMARCC1Q92922 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMARCC1Q92922 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SMARCC1Q92922 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 KRT18P23-201ENST00000435622 1283 ntBASIC24.23■■□□□ 1.47
SMARCC1Q92922 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 AC104390.1-201ENST00000555663 520 ntBASIC24.23■■□□□ 1.47
SMARCC1Q92922 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 UBC-206ENST00000538617 1303 ntTSL 5 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMARCC1Q92922 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SMARCC1Q92922 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.23■■□□□ 1.47
SMARCC1Q92922 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SMARCC1Q92922 AL391422.3-201ENST00000603791 2761 ntBASIC24.23■■□□□ 1.47
SMARCC1Q92922 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
SMARCC1Q92922 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 AL109659.2-201ENST00000606809 1674 ntBASIC24.22■■□□□ 1.47
SMARCC1Q92922 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
SMARCC1Q92922 HOXB1-202ENST00000577092 1414 ntBASIC24.22■■□□□ 1.47
SMARCC1Q92922 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.22■■□□□ 1.47
SMARCC1Q92922 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC24.22■■□□□ 1.47
SMARCC1Q92922 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 AC005332.3-201ENST00000589904 676 ntBASIC24.22■■□□□ 1.47
SMARCC1Q92922 TK1-205ENST00000590862 642 ntTSL 3 BASIC24.22■■□□□ 1.47
SMARCC1Q92922 AC010240.3-201ENST00000607688 395 ntBASIC24.22■■□□□ 1.47
SMARCC1Q92922 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC24.22■■□□□ 1.47
SMARCC1Q92922 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.22■■□□□ 1.47
SMARCC1Q92922 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SMARCC1Q92922 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
SMARCC1Q92922 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC24.21■■□□□ 1.47
SMARCC1Q92922 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
SMARCC1Q92922 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMARCC1Q92922 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
SMARCC1Q92922 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SMARCC1Q92922 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms