Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AP000525.1-201ENST00000608286 694 ntBASIC20.41■□□□□ 0.86
SEMA4DQ92854 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA4DQ92854 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.41■□□□□ 0.86
SEMA4DQ92854 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.41■□□□□ 0.86
SEMA4DQ92854 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.41■□□□□ 0.86
SEMA4DQ92854 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA4DQ92854 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.41■□□□□ 0.86
SEMA4DQ92854 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SEMA4DQ92854 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.41■□□□□ 0.86
SEMA4DQ92854 AL020996.1-203ENST00000536896 2307 ntBASIC20.41■□□□□ 0.86
SEMA4DQ92854 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA4DQ92854 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA4DQ92854 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA4DQ92854 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA4DQ92854 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 CRYGFP-201ENST00000418459 633 ntBASIC20.4■□□□□ 0.86
SEMA4DQ92854 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SEMA4DQ92854 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 AL390955.1-201ENST00000428694 934 ntBASIC20.4■□□□□ 0.86
SEMA4DQ92854 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.4■□□□□ 0.86
SEMA4DQ92854 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SEMA4DQ92854 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SEMA4DQ92854 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SEMA4DQ92854 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SEMA4DQ92854 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.39■□□□□ 0.86
SEMA4DQ92854 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA4DQ92854 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 KRT8P3-201ENST00000519669 1449 ntBASIC20.39■□□□□ 0.85
SEMA4DQ92854 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA4DQ92854 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA4DQ92854 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 AC008622.2-201ENST00000617006 1229 ntBASIC20.39■□□□□ 0.85
SEMA4DQ92854 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA4DQ92854 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA4DQ92854 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.39■□□□□ 0.85
SEMA4DQ92854 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA4DQ92854 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA4DQ92854 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA4DQ92854 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SEMA4DQ92854 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.38■□□□□ 0.85
SEMA4DQ92854 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
SEMA4DQ92854 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 UNC93B2-201ENST00000285383 730 ntBASIC20.38■□□□□ 0.85
SEMA4DQ92854 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.38■□□□□ 0.85
SEMA4DQ92854 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.38■□□□□ 0.85
SEMA4DQ92854 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 AC083906.6-201ENST00000641366 219 ntBASIC20.38■□□□□ 0.85
SEMA4DQ92854 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SEMA4DQ92854 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.38■□□□□ 0.85
SEMA4DQ92854 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SEMA4DQ92854 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SEMA4DQ92854 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SEMA4DQ92854 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.37■□□□□ 0.85
SEMA4DQ92854 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.37■□□□□ 0.85
SEMA4DQ92854 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.37■□□□□ 0.85
SEMA4DQ92854 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.37■□□□□ 0.85
SEMA4DQ92854 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 KRT17P2-201ENST00000300992 1314 ntBASIC20.37■□□□□ 0.85
SEMA4DQ92854 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SEMA4DQ92854 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.37■□□□□ 0.85
SEMA4DQ92854 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms