Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 CCR12P-201ENST00000446203 998 ntBASIC19.91■□□□□ 0.78
RNF139Q8WU17 AC128688.1-201ENST00000487626 519 ntBASIC19.91■□□□□ 0.78
RNF139Q8WU17 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 AC145285.6-201ENST00000604632 637 ntBASIC19.91■□□□□ 0.78
RNF139Q8WU17 AC097493.4-201ENST00000641197 219 ntBASIC19.91■□□□□ 0.78
RNF139Q8WU17 AC116562.4-202ENST00000641738 218 ntBASIC19.91■□□□□ 0.78
RNF139Q8WU17 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF139Q8WU17 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF139Q8WU17 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 TSPY14P-201ENST00000303979 915 ntBASIC19.9■□□□□ 0.78
RNF139Q8WU17 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 SLC25A1P2-201ENST00000430693 912 ntBASIC19.9■□□□□ 0.78
RNF139Q8WU17 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 CA15P1-201ENST00000481698 905 ntBASIC19.9■□□□□ 0.78
RNF139Q8WU17 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RNF139Q8WU17 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF139Q8WU17 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.89■□□□□ 0.77
RNF139Q8WU17 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RNF139Q8WU17 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF139Q8WU17 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNF139Q8WU17 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF139Q8WU17 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF139Q8WU17 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.88■□□□□ 0.77
RNF139Q8WU17 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.88■□□□□ 0.77
RNF139Q8WU17 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
RNF139Q8WU17 AC012306.2-201ENST00000609350 630 ntBASIC19.88■□□□□ 0.77
RNF139Q8WU17 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
RNF139Q8WU17 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF139Q8WU17 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF139Q8WU17 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RNF139Q8WU17 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF139Q8WU17 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms