Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.08■□□□□ 0.81
UBA3Q8TBC4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBA3Q8TBC4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UBA3Q8TBC4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBA3Q8TBC4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
UBA3Q8TBC4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.08■□□□□ 0.81
UBA3Q8TBC4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBA3Q8TBC4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBA3Q8TBC4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
UBA3Q8TBC4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.08■□□□□ 0.8
UBA3Q8TBC4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
UBA3Q8TBC4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
UBA3Q8TBC4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
UBA3Q8TBC4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
UBA3Q8TBC4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.05■□□□□ 0.8
UBA3Q8TBC4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 AC087499.1-201ENST00000418141 1075 ntBASIC20.05■□□□□ 0.8
UBA3Q8TBC4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 AC010947.1-201ENST00000623454 693 ntBASIC20.05■□□□□ 0.8
UBA3Q8TBC4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
UBA3Q8TBC4 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.05■□□□□ 0.8
UBA3Q8TBC4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms