Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 TSPY21P-201ENST00000433481 731 ntBASIC21.16■□□□□ 0.98
USP38Q8NB14 TSPY23P-201ENST00000440136 739 ntBASIC21.16■□□□□ 0.98
USP38Q8NB14 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
USP38Q8NB14 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.16■□□□□ 0.98
USP38Q8NB14 CKBP1-201ENST00000565489 1086 ntBASIC21.16■□□□□ 0.98
USP38Q8NB14 AL031432.5-201ENST00000641059 760 ntBASIC21.16■□□□□ 0.98
USP38Q8NB14 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP38Q8NB14 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.16■□□□□ 0.98
USP38Q8NB14 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP38Q8NB14 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.15■□□□□ 0.98
USP38Q8NB14 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.15■□□□□ 0.98
USP38Q8NB14 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.15■□□□□ 0.98
USP38Q8NB14 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
USP38Q8NB14 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.15■□□□□ 0.98
USP38Q8NB14 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 COX11P1-201ENST00000489116 835 ntBASIC21.15■□□□□ 0.98
USP38Q8NB14 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.15■□□□□ 0.98
USP38Q8NB14 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.15■□□□□ 0.98
USP38Q8NB14 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.15■□□□□ 0.98
USP38Q8NB14 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
USP38Q8NB14 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.15■□□□□ 0.98
USP38Q8NB14 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.15■□□□□ 0.98
USP38Q8NB14 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP38Q8NB14 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP38Q8NB14 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP38Q8NB14 KRT8P41-201ENST00000533985 1514 ntBASIC21.14■□□□□ 0.98
USP38Q8NB14 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
USP38Q8NB14 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP38Q8NB14 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.14■□□□□ 0.97
USP38Q8NB14 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.14■□□□□ 0.97
USP38Q8NB14 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
USP38Q8NB14 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
USP38Q8NB14 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.14■□□□□ 0.97
USP38Q8NB14 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.14■□□□□ 0.97
USP38Q8NB14 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.14■□□□□ 0.97
USP38Q8NB14 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP38Q8NB14 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
USP38Q8NB14 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.14■□□□□ 0.97
USP38Q8NB14 AC011558.1-201ENST00000623459 338 ntBASIC21.14■□□□□ 0.97
USP38Q8NB14 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
USP38Q8NB14 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.14■□□□□ 0.97
USP38Q8NB14 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP38Q8NB14 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP38Q8NB14 AP000974.1-201ENST00000623909 2387 ntBASIC21.14■□□□□ 0.97
USP38Q8NB14 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP38Q8NB14 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.14■□□□□ 0.97
USP38Q8NB14 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP38Q8NB14 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP38Q8NB14 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP38Q8NB14 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP38Q8NB14 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
USP38Q8NB14 AC005332.7-201ENST00000614046 2005 ntBASIC21.13■□□□□ 0.97
USP38Q8NB14 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
USP38Q8NB14 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.13■□□□□ 0.97
USP38Q8NB14 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
USP38Q8NB14 AC141257.4-201ENST00000634557 245 ntBASIC21.13■□□□□ 0.97
USP38Q8NB14 AC136944.6-201ENST00000634818 245 ntBASIC21.13■□□□□ 0.97
USP38Q8NB14 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.13■□□□□ 0.97
USP38Q8NB14 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.13■□□□□ 0.97
USP38Q8NB14 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.13■□□□□ 0.97
USP38Q8NB14 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP38Q8NB14 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
USP38Q8NB14 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP38Q8NB14 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.13■□□□□ 0.97
USP38Q8NB14 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP38Q8NB14 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP38Q8NB14 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP38Q8NB14 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.13■□□□□ 0.97
USP38Q8NB14 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.12■□□□□ 0.97
USP38Q8NB14 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
USP38Q8NB14 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP38Q8NB14 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms