Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 HTR7P1-202ENST00000624664 4411 ntBASIC19.69■□□□□ 0.74
CCDC89Q8N998 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC89Q8N998 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 AL390961.4-201ENST00000623958 2535 ntBASIC19.68■□□□□ 0.74
CCDC89Q8N998 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC89Q8N998 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC89Q8N998 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC89Q8N998 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC89Q8N998 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCDC89Q8N998 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC89Q8N998 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCDC89Q8N998 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC89Q8N998 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC89Q8N998 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC89Q8N998 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC89Q8N998 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC89Q8N998 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CCDC89Q8N998 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CCDC89Q8N998 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC89Q8N998 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC89Q8N998 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC89Q8N998 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 AC083906.6-201ENST00000641366 219 ntBASIC19.66■□□□□ 0.74
CCDC89Q8N998 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC89Q8N998 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC89Q8N998 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC89Q8N998 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 AL355802.2-201ENST00000402069 882 ntBASIC19.65■□□□□ 0.74
CCDC89Q8N998 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC89Q8N998 AC090192.1-201ENST00000517740 490 ntBASIC19.65■□□□□ 0.74
CCDC89Q8N998 UNC93B5-201ENST00000530315 699 ntBASIC19.65■□□□□ 0.74
CCDC89Q8N998 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC89Q8N998 NBPF21P-201ENST00000425093 1451 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms