Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VPS52Q8N1B4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 PCED1CP-201ENST00000419887 785 ntBASIC20.53■□□□□ 0.88
VPS52Q8N1B4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 AL359075.1-203ENST00000462729 1002 ntBASIC20.53■□□□□ 0.88
VPS52Q8N1B4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 AL121956.5-201ENST00000625261 221 ntBASIC20.53■□□□□ 0.88
VPS52Q8N1B4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 AC087289.5-201ENST00000586076 3175 ntBASIC20.53■□□□□ 0.88
VPS52Q8N1B4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 AL691432.2-201ENST00000607222 2038 ntBASIC20.53■□□□□ 0.88
VPS52Q8N1B4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS52Q8N1B4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.52■□□□□ 0.88
VPS52Q8N1B4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.52■□□□□ 0.88
VPS52Q8N1B4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 FAM86EP-206ENST00000510506 987 ntBASIC20.52■□□□□ 0.88
VPS52Q8N1B4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.52■□□□□ 0.88
VPS52Q8N1B4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS52Q8N1B4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.52■□□□□ 0.87
VPS52Q8N1B4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VPS52Q8N1B4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.52■□□□□ 0.87
VPS52Q8N1B4 KRT8P45-201ENST00000414328 1447 ntBASIC20.52■□□□□ 0.87
VPS52Q8N1B4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VPS52Q8N1B4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
VPS52Q8N1B4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
VPS52Q8N1B4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
VPS52Q8N1B4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VPS52Q8N1B4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.5■□□□□ 0.87
VPS52Q8N1B4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VPS52Q8N1B4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.5■□□□□ 0.87
VPS52Q8N1B4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms