Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC50Q8IVM0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 HLA-L-209ENST00000420110 1011 ntBASIC20■□□□□ 0.79
CCDC50Q8IVM0 UNC93B5-201ENST00000530315 699 ntBASIC20■□□□□ 0.79
CCDC50Q8IVM0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20■□□□□ 0.79
CCDC50Q8IVM0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC50Q8IVM0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC50Q8IVM0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 RNA5SP413-201ENST00000516373 109 ntBASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC50Q8IVM0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms