Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 AC091799.1-201ENST00000422823 811 ntBASIC15.78■□□□□ 0.12
ZNF546Q86UE3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 DUX4L2-201ENST00000561772 1275 ntBASIC15.78■□□□□ 0.12
ZNF546Q86UE3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 AL031963.3-201ENST00000606441 850 ntBASIC15.78■□□□□ 0.12
ZNF546Q86UE3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 DUX4L6-201ENST00000626483 1275 ntBASIC15.78■□□□□ 0.12
ZNF546Q86UE3 DUX4L1-201ENST00000627662 1275 ntBASIC15.78■□□□□ 0.12
ZNF546Q86UE3 DUX4L8-201ENST00000629013 1275 ntBASIC15.78■□□□□ 0.12
ZNF546Q86UE3 DUX4L3-201ENST00000630187 1275 ntBASIC15.78■□□□□ 0.12
ZNF546Q86UE3 DUX4L7-201ENST00000630678 1275 ntBASIC15.78■□□□□ 0.12
ZNF546Q86UE3 DUX4L5-201ENST00000630834 1275 ntBASIC15.78■□□□□ 0.12
ZNF546Q86UE3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ZNF546Q86UE3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 KRT8P20-201ENST00000423953 1409 ntBASIC15.77■□□□□ 0.12
ZNF546Q86UE3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ZNF546Q86UE3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF546Q86UE3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF546Q86UE3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ZNF546Q86UE3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF546Q86UE3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF546Q86UE3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
ZNF546Q86UE3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.77■□□□□ 0.11
ZNF546Q86UE3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.76■□□□□ 0.11
ZNF546Q86UE3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 AC012317.2-201ENST00000623305 2251 ntBASIC15.76■□□□□ 0.11
ZNF546Q86UE3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF546Q86UE3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ZNF546Q86UE3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms